| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1153 |
|---|
| Symbol | |
|---|
| ID | 6877126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1124262 |
|---|
| End bp | 1125281 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642789030 |
|---|
| Product | phosphate ABC transporter, periplasmic phosphate-binding protein |
|---|
| Protein accession | YP_002219598 |
|---|
| Protein GI | 198283277 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AGGGTGTGGC TTTTGTGTTG GGGGTGATGA GCCTGGGTGT GGCAGGGCTG
GCGCAGGCGG AAACCATTTC CGCCGCAGGC GGCACAGCCA TTTATCCCGT CCTGTCCAAA
TGGGCGGAAA CTTACAAACA GAAAACCGGC ATCATGGTGA ATTATCAGGC CATCGGTTCC
GGTGGCGGGA TTGCCCAAAT CAAGGCCAAA ACCGTCGCTT TCGCCAACAG CGACATGCCT
CTCCAGCCTG AATATCTCAA CAAAGACCAG CTCGTCCAGT TTCCGGCTGT GATTATTGGC
ATTACCCCCG TCGTGAATGT CCCCGGTATA AAGCCCGGTG AACTGACCTT CAACGGCGCC
GTACTCACCG GTATTTATCT GGGCAAGATC AAGAAATGGA ACGACGCGGC CATTGCCGAC
CTCAATAAGG GCGTTCATCT GCCGGATATG AATATCACGG TGGTCCATCG TTCTGACGGT
TCCGGAACCA CCTTCAACTT TACCAATTAT CTGGCCAAGG TCAGCCCGGA ATGGAAGCAA
CGGGTGGGCG ATAACACGGC TGTTTCCTGG CCCGTCGGTG TGGGTGGCAA GGGCAATGCG
GGCGTCGCCG CATATGTACA GCGGATTCCT GGAGCCATCG GCTACGTGGA ATATGCCTAC
GCCAAGGAAA ATCACATGGC TTACGGCAAA ATGATCAATG CTGCGGGCAA GGTGGTGGCC
CCTGATCTGG CTACTTTCCA GGCCGCCGCG GCAAATGCGG ATTTTACCAA GGTAGAGGAT
TTCTACGTGA TTCTCACCAA CCAGCCGGGT GCCCAGAGTT GGCCCATTTC CGCTGCGACT
TACATCCTGA TGCGCCAGGA TGCCCATAAG ACGGTCAATG CGGGAGTCCT GAAGTTTGCA
CGCTGGTTCC TGACAGCCCC GCAGGCGCAA GCGGAAGCCA GGGGCCTGGA TTATGTGCCA
TTACCAAAAA CTACGGTGAC GCAGATTGAG GCGTACTGGA AAAGGAATCT GGGCCAGTGA
|
|---|
| Protein sequence | MKIKGVAFVL GVMSLGVAGL AQAETISAAG GTAIYPVLSK WAETYKQKTG IMVNYQAIGS
GGGIAQIKAK TVAFANSDMP LQPEYLNKDQ LVQFPAVIIG ITPVVNVPGI KPGELTFNGA
VLTGIYLGKI KKWNDAAIAD LNKGVHLPDM NITVVHRSDG SGTTFNFTNY LAKVSPEWKQ
RVGDNTAVSW PVGVGGKGNA GVAAYVQRIP GAIGYVEYAY AKENHMAYGK MINAAGKVVA
PDLATFQAAA ANADFTKVED FYVILTNQPG AQSWPISAAT YILMRQDAHK TVNAGVLKFA
RWFLTAPQAQ AEARGLDYVP LPKTTVTQIE AYWKRNLGQ
|
|---|
| |