Gene Lferr_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1152 
Symbol 
ID6877125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1122864 
End bp1124192 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content60% 
IMG OID642789029 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002219597 
Protein GI198283276 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTACC TCCGTGCCTG GTTTTACCCC TTGGCGCTCT GGGCGTTGAT TCCAATTTTT 
CTGGCCGCCG ATGATCTGCA CGCCTGGTCC TACCTCCCAC TGGTGATCAT CGCTTTCTTG
CTGGCGCTCT GGGTCGGATG GCATCGCCAG CAATCCCTGA GTTTCAGCGC TTGGTTCCGT
AACCCGTCTA CCTCGTTGCC ACCGCTAGCG GGGGGGATGT GGGAGGAGAC GTTTGCCGAG
GGCTACCACT GGCGACGTGA TCAGGAGGCG CAGCACCGCC AGCTCAGCGC CCAGATCGTA
CAGTTGCGTG ACGCCTTGCA GGCGATGCCC GATGTTGTGG TATTGATGGA CGAGCGTGGC
CAATTGCTCT GGGTGAATCC TTCGGGTATC CGCTTGCTGC AACTGCAATG GCCCGATGAC
GCGGGCAAGC CGCTGGCTTT CTGGCTGCGG ACTCCGCATC TGCGCGCCTT TCTCGCCGGC
GAAGGGCCAC CCAGCCTGCA GCTCCCGGCC CCGGCAGATG CACAACAGAT TTTGGAGGGC
ATGCGTTATC CCCTCGCCGA TGCGGGTGCT TTGGTCATCT TCCGGGATGT GACCCGTATC
CGTCAGCTTG AACAGGTCCG TCAGGACTTC GTAGCCAATG TCTCCCATGA GTTGCGCAGC
CCGCTGACGG TGGTACGCGG TTTCCTGGAA AACATGCTGG ACAGTCCCAT CGCTGCCGAC
GATGAGGTGA GTAGTCAACT CCGTCTCATG GAACAGCAGA CGCTGCGCAT GCAGTCTTTG
GTCGAAGACT TGCTGTCTCT GGCACGTATG GAGGCCGCCG AGGCGAATCC GGAACACTGC
GAAACGCTCA TGATCGCGGC TATGATACAC AACACCCTGG ACACCCTGGC CCCCGCCATA
GTGCAAAAAC GGTTGCAGAT CGACACGGCG CTGGATGGCG ACTTGGGCAT TTTCGCAGAA
ACCATCGATC TGACCAGTAT CATCCGAAAC TTGTTGGAAA ACGCCATCAA ATATACCCCG
GCGGACCGCA CCGTCAGCGT GCGCTGGGAA CGTCGCTCGG GCGATCTGCG TTTGGTGGTG
CAGGATACCG GCGACGGTAT CGCTGCCGAG CACTTGCAGC GTATCACCGA GCGTTTTTAT
CGGGTGGACA AAGGTCGCTC CCGACGCATG GGGGGTACGG GGCTGGGACT GGCCATTGTC
CGTCACGCTG TCGAGCGTTA TCAGGGGTAT CTGGAAGTGG CTAGTGAAGT GGGTAAGGGA
ACCACTTTTA CTGCGCATTT TCCGCTCCAT CTCGCCCGCA GCTTTCCTTC CGACTCCGCA
GTGTCATAA
 
Protein sequence
MKYLRAWFYP LALWALIPIF LAADDLHAWS YLPLVIIAFL LALWVGWHRQ QSLSFSAWFR 
NPSTSLPPLA GGMWEETFAE GYHWRRDQEA QHRQLSAQIV QLRDALQAMP DVVVLMDERG
QLLWVNPSGI RLLQLQWPDD AGKPLAFWLR TPHLRAFLAG EGPPSLQLPA PADAQQILEG
MRYPLADAGA LVIFRDVTRI RQLEQVRQDF VANVSHELRS PLTVVRGFLE NMLDSPIAAD
DEVSSQLRLM EQQTLRMQSL VEDLLSLARM EAAEANPEHC ETLMIAAMIH NTLDTLAPAI
VQKRLQIDTA LDGDLGIFAE TIDLTSIIRN LLENAIKYTP ADRTVSVRWE RRSGDLRLVV
QDTGDGIAAE HLQRITERFY RVDKGRSRRM GGTGLGLAIV RHAVERYQGY LEVASEVGKG
TTFTAHFPLH LARSFPSDSA VS