Gene Lferr_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1146 
Symbol 
ID6877119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1117919 
End bp1118560 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID642789023 
Productcytochrome c family protein 
Protein accessionYP_002219591 
Protein GI198283270 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCTG TATTATCATC GAGCCGTTTC GCTCCTTCCC AAAAGAAGGG TGTTATCTGC 
ACTGCCGCCG TAGCGTTGGC GATATTGAGC GCAGGTCCAG CACTGGCGCA GGTGCCACAA
TCTGTCCATC AGTCATGCAT GATCTGCCAC GGGCAGACCG GCGAAAATAC CATCTATCCG
ATGGTTCCGC GCCTGAGCGG CCAACAGGTG CAATATCTGG CATGGCAGCT GAAGCAGTTC
AAGGCGCATA CCCGTGCGGA TCAAAATGCG CAGATTTACA TGTGGCCGGT CGCGCAGGCC
ATGAGTCAGA AGGAAATCCA GTCGGTTGCG AAGTATTATG CGGCGCAATC GCCCATGCAC
AGCGCATCCT CGCCACGTCC CGGAGTCTCC GCGGGTAAGC AGATATTCCT GCAGGGGGTC
GCTGCACAGG GTGTTCCCGC GTGTATGGCC TGCCACGCCG TGAACGCGAC AGGTCGAGGG
ATATTCCCGC GACTGGCCGG GCAGCGATAT GCATATATCG TTCAGCAGCT AACCTATCTG
CATGATGGAA ACCGGGTGAA TCCCATCATG CAGCCCGTGG CGGAAAAGCT GACCAACCGG
CAAATGCGGG AGGTGGCGGC TTATCTGTCC GGTCTGCATT GA
 
Protein sequence
MYPVLSSSRF APSQKKGVIC TAAVALAILS AGPALAQVPQ SVHQSCMICH GQTGENTIYP 
MVPRLSGQQV QYLAWQLKQF KAHTRADQNA QIYMWPVAQA MSQKEIQSVA KYYAAQSPMH
SASSPRPGVS AGKQIFLQGV AAQGVPACMA CHAVNATGRG IFPRLAGQRY AYIVQQLTYL
HDGNRVNPIM QPVAEKLTNR QMREVAAYLS GLH