Gene Lferr_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1125 
Symbol 
ID6877097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1101054 
End bp1101443 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content65% 
IMG OID642789006 
Productholo-acyl-carrier-protein synthase 
Protein accessionYP_002219574 
Protein GI198283253 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.617257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGG GAATGGGGAC GGATATCGTT GCCGTCGAGC GAATGGCCCG TCTCCATGCC 
CGCTTCGGGG AACGTCTGAC CGAGCGTCTG CTGGGACCTT TGGAGGTGGC GGACATGCCG
GTGGAAGCCG CGGCCGGCGC CGCTTTTCTG GCGCGACGTT TCGCGGCCAA GGAGGCCACA
TTCAAAGCCT TGGGTAGCGG CATGACTAAT GGGATGCGCT GGATGGACGT GCAGGTGGGC
CACGATTCGG GCGGGCGTCC GCAATTGGTG CTGGGCGGTC GCGCGCAACA GCTCCTACGG
GGGCTCGGGG ATGGCGTGCG CAGTTGGCTG TCCATCAGCG ATGAGCGTCG CTATGCCATG
GCGGTCGTGG TGCTGGAACG GGGAGGATAG
 
Protein sequence
MIVGMGTDIV AVERMARLHA RFGERLTERL LGPLEVADMP VEAAAGAAFL ARRFAAKEAT 
FKALGSGMTN GMRWMDVQVG HDSGGRPQLV LGGRAQQLLR GLGDGVRSWL SISDERRYAM
AVVVLERGG