| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1122 |
|---|
| Symbol | |
|---|
| ID | 6877094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1098664 |
|---|
| End bp | 1099578 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642789003 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_002219571 |
|---|
| Protein GI | 198283250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA TCAAGAGCGG CGCTCCTGAC GAAGGGTACC GCAGCGGATA TGTGGCGCTG
CTCGGGCGTC CTAATGTCGG TAAATCCACC CTGCTGAATC ATCTGGTCGG GCAGAAAATC
AGCATCACGG CGCCGCGTCC GCAGACTACC AGGGATCAGA TTCTCGGGAT ACTGACCCGC
CCCGACGGAC AACTGCTCTT TCTGGATACG CCGGGCGTGC ATAGTGGCTA TCGCAGCCTG
AACCGACACC TGCTGCGGGC CACCCGGGGG GCGCTGGAAT CCGCGGATCT GGGCGTGCTG
GTGGTAGAGG CGCTGCTGTG GACCCATGAC GACGCGGAGG CCCTGCGCTG GTTGCAGCGG
GCCGGTATTC CGCTGGTGGC CGTGGTAAAC AAGGTGGATC GGGTTGCGAG CAAGGCGCGT
CTGTTTCCCT ATCTGCAGGC ATTGGCGGAG CGTGGAGAAT TCGCGGCGAT CATACCACTC
TCGGCGCGCA GGGCGCCGGA CGTGGAGCGT CTGGCTGATG TGCTGGTGCC ACTATTGCCA
CCGGCTCCGG CGGCTTTCCC GGAGGATCAG GTCACCGATC GCAATCTGCG GTTTATGGCG
GCAGAAATCA TTCGCGAGCA GATATTCCGG CAACTCGGTG CGGAACTACC CTACGACACG
GCCGTTGCCA TTGAAAGCTA TCAGGTGGAA GGTGGCCAGC AGCGCATAGA GGCGACCATT
TATTGTCGGC GGCCGGGGCA GAAAGCCATT ATTCTGGGCG ACGGCGGCAA CCGTCTGCGG
GTGATCGGCA GCCGGGCGCG GGAGGCACTG CAGCAGTTGA CCGAAGAGCG GGTCTGGCTG
GGATTATGGG TCAAGCAGAA GGAACAGTGG TCGGAAGACC ATCATATCCT GCGCGAGTTG
GGGTATGACG ACTGA
|
|---|
| Protein sequence | MDEIKSGAPD EGYRSGYVAL LGRPNVGKST LLNHLVGQKI SITAPRPQTT RDQILGILTR
PDGQLLFLDT PGVHSGYRSL NRHLLRATRG ALESADLGVL VVEALLWTHD DAEALRWLQR
AGIPLVAVVN KVDRVASKAR LFPYLQALAE RGEFAAIIPL SARRAPDVER LADVLVPLLP
PAPAAFPEDQ VTDRNLRFMA AEIIREQIFR QLGAELPYDT AVAIESYQVE GGQQRIEATI
YCRRPGQKAI ILGDGGNRLR VIGSRAREAL QQLTEERVWL GLWVKQKEQW SEDHHILREL
GYDD
|
|---|
| |