Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1121 |
Symbol | |
ID | 6877093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1097991 |
End bp | 1098671 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789002 |
Product | Ribonuclease III |
Protein accession | YP_002219570 |
Protein GI | 198283249 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTT TAGAATCTCT GCAACAGTCG GTCGGCTATC AATTCCGTGA GCAGTCCCTG CTGTTGCAGG CGCTGACCCA TCGAAGTGCG GGCGCCCGGC ACAATGAACG GCTGGAGTTT CTGGGGGACG CGGCACTGAA TTTTGTAGTA GCGGCAAAAC TCTTCGCCCG CTTTCCCAAG GTGAGCGAGG GGGATCTGTC GCGGATGCGG GCACGGCTGG TTCGGGAGGA AACCCTGGCG GAGATCGCCG GAAAAATCGC TTTGGCCGAT TCCCTGATCC TGGGCCCCGG AGAAATACGC AGCGGTGGCG CCCGGCGAGA CTCCATCCGC GCCGATGCCT TGGAGGCGGT GATTGGTGCG GCTTTCCTGG ATGGCGGCTT TGGTGCGGCG GAGCGTATCG TTGCACAACT GGTCGAGCCC TTGATGACTG ATGACCTGGG TGGCGAAGAG TTGCGCGATC CCAAAACGCG CCTGCAGGAA TTCCTGCAGG GACAGGGACG TCCTGTACCC GTCTATACGA CGGTGGCGGA AAAAGGACAG GCCCATGAGC GGCGTTTCGT GGCGCGTTGC AGTGTGCCTG GCGCCGAAGC TACCGAAGCG GAGGATGGCA GCCGGCGGAA AGCCGAACAG CAGGCGGCGG CGCTGATGCT GGCACAACTG CAGGTTGCCG TGCATGGATG A
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Protein sequence | MDVLESLQQS VGYQFREQSL LLQALTHRSA GARHNERLEF LGDAALNFVV AAKLFARFPK VSEGDLSRMR ARLVREETLA EIAGKIALAD SLILGPGEIR SGGARRDSIR ADALEAVIGA AFLDGGFGAA ERIVAQLVEP LMTDDLGGEE LRDPKTRLQE FLQGQGRPVP VYTTVAEKGQ AHERRFVARC SVPGAEATEA EDGSRRKAEQ QAAALMLAQL QVAVHG
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