Gene Lferr_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1114 
Symbol 
ID6877086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1090045 
End bp1091634 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content63% 
IMG OID642788995 
ProductL-aspartate oxidase 
Protein accessionYP_002219563 
Protein GI198283242 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTT TCGACTTTCT GATTATCGGC TCCGGCACCG CCGGGCTGAG CACGGCTCTG 
GGGCTCAGCC GACTCGGCCG TGTCGGCCTC GTAAGCAAAG GGCGGGCGGA TGATTCCGCC
AGTGACAGAG CGCAGGGCGG CATTGCAGCG GTCATGGATA TGGATCACGA CAGCATTGCC
CTGCATATCG AAGACACCCT GGGAGCCGGA GCGGGACTTT GTCACCCGCA GGCAGTCCGG
CAGATCATCG GCCGGGGCCC GGACGCCGTG CGCCAATTAA TCGACTGGGG GGTACCCTTT
GACCGCCAGC CGGATGGAAG CTGGCATCTC ACCCGTGAAG GTGGACACCA GGCCCGTCGG
GTACTGCACA GTGCCGATAC CACGGGCCAC GTCATCGAAA GCACCCTGCT GCGCCGGGTG
CTGGCGGAAC CCGCCATCCA GATGGCCGAA GGACACTATG CCAGTGATCT CTGGCTCACC
GAGGACCGTT GCCAGGGCGC CTGGGTGCTT CCCCCAAAGG GCGATCATCC CGAGTTGTGG
ACGGCACGGG CAGTAGTGCT CGCCAGCGGC GGGGCGGGAC AGTTGTATCT GCACACCAGC
AATCCGCTGG TGGCCACCGG AGACGGCATC GCGCTGGCCT GGCGGGCGGG CGCGGAAATT
GCCAATCTGG AATTTATCCA GTTTCATCCC ACGACGCTTT ACCAGCCGGG TAGCCAACCT
TTCTTATTGT CTGAAGCCTT ACGGGGCGAG GGTGCCATCC TGCGTCTACC GGATGGCAGC
ACTTTTCTGG AGCGTTACGA CCCGCGTGCC GAGCTGGCGC CGCGGGATAT CGTCGCGCGC
GCCATCGATT TGGAGATGAA GCAACATCAA CTCGACTATG TCACTCTGGA TATCAGTGCA
CAGCCAGCCA CCTTGGTGCG CCGGCATTTC CCCGCCATCT TTGCACACTG CCGCGCACAA
GGCTATGATC TGACACGAGA ATCCATTCCA GTGGTTCCCG CTGCCCATTA CAGCTGTGGT
GGCGTGGTCG TGGATGAGGC GGGGCGCAGT ACCATTCCGG GCCTTTATGC GGCAGGCGAG
GTCAGTTCTA CCGGACTGCA CGGCGCCAAT CGTCTCGCCA GCAACTCACT GCTGGAATGT
GTGGTGGGTG CGGCGGCCAT TGTTGCGGAC CTGGAAGGGC AAGCGCGCCT GCCCGACAGA
CCACGGCAAA CGCCGGGGCG ATCGCCGGGG CAACCAACCA CTGCCGCACG CCGGACGGAC
ATCAACGCCC TGCGGCAGAA CCTGCAGGTA AATATGTGGC AGGCGGCGGG CATCGTCCGC
AACGACGAGG GCTTGCGCGC CGCCTGCGCG TATTGGGATG AACGGGGTAC GCACATCAGC
GACAGCCTGT GTGGACCGCA GCCGTATCAG GAACTGCGCA ACCTCTGCCA ATGCGCGAAA
ATCCTCACCT GTGCCGCGCT GCTGCGAGAA GAATCCCGCG GCTGCCATTT CAACAGTGAC
CACCCGCAAC GCCGTGCCGT CGCGGCGGAC AGTATCAGCC AGCGGGATCA GCAGTCTCCG
TTTTTGCGTC CCATTCCTGG CGCAGCCTGA
 
Protein sequence
MPSFDFLIIG SGTAGLSTAL GLSRLGRVGL VSKGRADDSA SDRAQGGIAA VMDMDHDSIA 
LHIEDTLGAG AGLCHPQAVR QIIGRGPDAV RQLIDWGVPF DRQPDGSWHL TREGGHQARR
VLHSADTTGH VIESTLLRRV LAEPAIQMAE GHYASDLWLT EDRCQGAWVL PPKGDHPELW
TARAVVLASG GAGQLYLHTS NPLVATGDGI ALAWRAGAEI ANLEFIQFHP TTLYQPGSQP
FLLSEALRGE GAILRLPDGS TFLERYDPRA ELAPRDIVAR AIDLEMKQHQ LDYVTLDISA
QPATLVRRHF PAIFAHCRAQ GYDLTRESIP VVPAAHYSCG GVVVDEAGRS TIPGLYAAGE
VSSTGLHGAN RLASNSLLEC VVGAAAIVAD LEGQARLPDR PRQTPGRSPG QPTTAARRTD
INALRQNLQV NMWQAAGIVR NDEGLRAACA YWDERGTHIS DSLCGPQPYQ ELRNLCQCAK
ILTCAALLRE ESRGCHFNSD HPQRRAVAAD SISQRDQQSP FLRPIPGAA