| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1110 |
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| Symbol | |
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| ID | 6877082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1086516 |
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| End bp | 1088273 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788991 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC |
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| Protein accession | YP_002219559 |
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| Protein GI | 198283238 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATC TTTACCGGCT GCTGAAACTG TTTGGGCCCT TTAAGTTCTG GATGCTGGGA
GGCGCCTTTC TGGCCCTGCT GACCATTCTT TCCAATTTCG GTCTGCTGGC CCTTTCCGGC
TGGTTTCTGG CGAGTGCGGC GCTGGCCGGA CTGGGTGGTT ACGCCACCAT GAATTTATAT
AACTTCTTCC TGCCGGCTGC CGGGGTGCGC GCTTTTGCGA CGACCCGGGT CATCTCGCGC
TGGCTGGAGC GCATTGTCAC CCATGAGGCG ACGTTCCGTC TGCTGGCCCA GTTGCGCACC
TGGTTCTACA CCCGCCTCGA GCCGCTCGCG CCCGCCGGGC TGCAAGGTTA TCGTTCCGGC
GATATTCTTT CGCGCCTCGT CGCCGATATC GATATTCTGA ATAATTTTTA CCTGCGGGTG
TTTACGCCGT TTCTGGTGGC CGGGGTGGCG ACGCTCACGA TGGCGGGCGT CTTCGCTTTT
TTCTCCTGGC GGTTGGCCAT TGCACTCTTT CTTTTCCTCG CGGTTACCGG CCTGCTTCTA
CCGCTCCTCA CGGAGCGGCT GGGTGCGCGC AGTGGCGCCG AGATGACCGG CATCCAGTCG
GATTACCGGG TACAGGTGGT GGACGGCATG CAGGGCATGG CTGAACTGTT GACCTATAAT
GCCGGGCCGG AGATTCTGCG ACGCACGGGC ACACTCAACG ATGCGCTGCT CCGGCGGCAG
GCCCACATGG CGCAGATCGC CGGATTCGGC AACGCCGGCA TGGGATTCAT GGGCAATCTG
GCGATTTGGG TTGTCGTGGT GCTGGCTATT CCTCTGGTCC ATGGCAGGGT TCTGGGCAAT
TCGGATCTGC CCCTCCTGGC CCTCGGCGTG ATGGGTTCCT TCGAGGCCAT CGCCGCCTTG
CCGCTGGCCT TTCAGTTTCT GGGGCAAACC CGCGCGGCCG CGCGCCGTAT TTTTGAGGTG
GCGGATACGC CCTTGCCGTT TCCGGATGCA TCGGGACCCG CACCGCGGGT GGACCGGCCG
GATCTGGAGC TCAAGGATCT GCACCTGCGC TATCCCGGCG CCCAACGCGA CGCCCTGGCA
GGCGTGGACC TCAGCATCCC GGCGGGCACA TGGGTTGCGA TCCTGGGGGC GACCGGGGCT
GGCAAGAGCA GCCTCGCCAA CCTGCTGCTG CGTTTCTATG ACTATCAATC GGGCAACGCG
TATCTGGGTG GCCATGAGTT GCGGGATTTC CCGGCAGACA ATCTGCGCGC ATATTTCGCT
GTCGTATCCC AGCGCTCTTA TCTCTTTCAC AGTACGATCC GCGACAACCT GCTGGTGGCC
AAGGGCGAGG CGGAGGAGGA TGAACTCTGG GCGGCGCTGG CCACGGCACA GCTTGCGGAG
TTCGTGCGCA GTCAGCCCCA GGGCCTGGAT ACCATTGTCG GCGAAGGCGG GGTGAAACTC
TCCGGTGGTC AAGGCCGGAG AGTGGCCATT GCCCGGGCGA TTCTCAAGGA CGCTCCGTGG
CTGATTCTGG ATGAGCCGAC CGAAGGGCTC GATCCGGTGA CCGAGATGGA GTTCCTCAAA
GACCTGCGCC AGATCATGGA AGGCCGCACC GTGCTCTATA TTACCCATCG TCTGGTGGGC
CTGGAGCACA TGGACTGCGT TCATATTCTC GACGAGGGGC GGATCGTGGA GTCGGGGACC
TATGGGGAGC TTTTACAGCG GGATGGACAA CTCAGCCATT TCGCCACGTT CGGACAGGCT
ATTCCGGAGA TTCACTAA
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| Protein sequence | MRDLYRLLKL FGPFKFWMLG GAFLALLTIL SNFGLLALSG WFLASAALAG LGGYATMNLY
NFFLPAAGVR AFATTRVISR WLERIVTHEA TFRLLAQLRT WFYTRLEPLA PAGLQGYRSG
DILSRLVADI DILNNFYLRV FTPFLVAGVA TLTMAGVFAF FSWRLAIALF LFLAVTGLLL
PLLTERLGAR SGAEMTGIQS DYRVQVVDGM QGMAELLTYN AGPEILRRTG TLNDALLRRQ
AHMAQIAGFG NAGMGFMGNL AIWVVVVLAI PLVHGRVLGN SDLPLLALGV MGSFEAIAAL
PLAFQFLGQT RAAARRIFEV ADTPLPFPDA SGPAPRVDRP DLELKDLHLR YPGAQRDALA
GVDLSIPAGT WVAILGATGA GKSSLANLLL RFYDYQSGNA YLGGHELRDF PADNLRAYFA
VVSQRSYLFH STIRDNLLVA KGEAEEDELW AALATAQLAE FVRSQPQGLD TIVGEGGVKL
SGGQGRRVAI ARAILKDAPW LILDEPTEGL DPVTEMEFLK DLRQIMEGRT VLYITHRLVG
LEHMDCVHIL DEGRIVESGT YGELLQRDGQ LSHFATFGQA IPEIH
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