| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1109 |
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| Symbol | |
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| ID | 6877081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1084766 |
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| End bp | 1086523 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788990 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_002219558 |
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| Protein GI | 198283237 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA TACCGGCGCA GCGGATGGAT CAGCGGTTGA TGCGGGAAGG GCGGCGCACC
CGGGGTACGC TCTATTTCGG CATCGGACTG GGCCTGGCGG CTGGCCTGCT GATCATTCTC
CAGGCCTTTC TGTTGGCGCA CATCGTCGAC GATGTCTCTT TTCATGGCTG GAATCTCGCG
GCGGTGATGC CGCTGCTCTG GATCATGCTC GCTCTTTTCG TCGTGCGTGC GGGGTTTTCC
TGGGCGAGCG AACTGGTCGC CTTTCACGCC AGCGCGCGTA TCAAGACCTA CCTGCGCGAG
CGCCTGCTTT CCCACCTTCT GAACCTGGGG CCGGTGGCCG TGGCGGGTGA GCGCAGCGCC
GACATCGCCA GCACCATGAT TGAAGGTGTC GAGGCGCTGG AGCCTTACTT TTCGCGTTAC
CTGCCGCAAA TGGCCTTGGT CAGCCTCATA CCGCTGGCCA TCCTCGTGTT CGTTTTCCCC
GCAGACTGGA TCAGCGGCCT GATTCTCCTC ATCGCCGGGC CGCTCGTGCC CTTCTTCATG
GTGCTGGTGG GCTACAAGGC GGAGGCCATC AACCAGCGTC AGTGGCGCAA GATGCTGTTG
ATGAGTGCCC ATTTTCTGGA TATGGTGCAG GGCTTGACCA CGCTGAAAAT CTTCGGCCGC
GCCAAGGACG AGATCGAGAT CGTCGCACGT ATTTCGGATG ACTACCGGCG CACCACCATG
GCCGGGTTGC GGGTGGCCTT CCTGACGTCG GCGGTGCTGG AATTTTTTGC GAGCGTGTCC
ATCGCTCTGG TGGCCGTATC GTTGGGTGCG CGTCTGCTGG AGATCCCTCC CCCGGTCACC
TTTTATACCG CCTTCTTCGT TCTTTTACTG GCACCGGAGT ATTTCAACCC GCTGCGTGGC
CTCGCCATCC ATTATCATGC GCGGATGAGC GCCATTGCCG CCGCCAGACG CATCTTCGAT
ATCCTCGACA CGCCGCTGCC GGCACAGGGT ACGCAGACGA TGGCGTACCC CGACACCCAA
TCCGTCAGTC TCTCGGTGCA CGACCTGCAT TTCTCCTATG AGGAGGGCCG GGTGGCGCTG
GCGGGTGTCA ATGCCGAGTT CCCGGCGGGC AAGGTCACTG CGCTGGTGGG CGCCAGCGGA
GCGGGCAAGA GTACCCTCGC CAATGCGTTG CTCGGCTTTG TGCAACCGGA TTCGGGAGAA
ATCCTGATCA ATGGCCGGAT CCCTTTGGCC GTCCTGGACC GGGAAAGCTG GTGGCGGCAA
CTGGCCTGGG TGCCGCAGAA TCCCCGCCTG TTTCACGGTA CCATCGCCGA AAATATCCGC
ATCGGGCGCC CTGATGCGGA TATGGCCGCC CTGCGGGAGG CCGCGAAAAA CGCTCACGCG
CTGGAATTCA TCGAGGCTTT GCCCCAGGGC TTCGATACCC CGGTGGGGGA TCTGGGGCAG
GGCCTTTCCG GCGGCCAGAT TCAGCGCGTC GCCTTGGCCC GCGCCTTTGT CAAAAACCCA
CCGATCTTCA TTCTGGATGA GGCTACGGCG AGTCTGGACA TGGAGAATGA ATCGCTAGTC
CTGGACGCCA TGCAGCGGCT GATCCAGGGA CGAACGGCGA TCGTCATTGC GCACCGCCTG
GCGATGGCAG AACGCGCTGA TCAGATCCTG GTCATGGACG CCGGGAAAGT GGTCGAAGCC
GGTACCCATA ATGCACTTTT GGCGGCTGGC GGTGTCTACG CAAGGCTGGC GGCAGCCTAT
CGGGGGGACC ATGCGTGA
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| Protein sequence | MAQIPAQRMD QRLMREGRRT RGTLYFGIGL GLAAGLLIIL QAFLLAHIVD DVSFHGWNLA
AVMPLLWIML ALFVVRAGFS WASELVAFHA SARIKTYLRE RLLSHLLNLG PVAVAGERSA
DIASTMIEGV EALEPYFSRY LPQMALVSLI PLAILVFVFP ADWISGLILL IAGPLVPFFM
VLVGYKAEAI NQRQWRKMLL MSAHFLDMVQ GLTTLKIFGR AKDEIEIVAR ISDDYRRTTM
AGLRVAFLTS AVLEFFASVS IALVAVSLGA RLLEIPPPVT FYTAFFVLLL APEYFNPLRG
LAIHYHARMS AIAAARRIFD ILDTPLPAQG TQTMAYPDTQ SVSLSVHDLH FSYEEGRVAL
AGVNAEFPAG KVTALVGASG AGKSTLANAL LGFVQPDSGE ILINGRIPLA VLDRESWWRQ
LAWVPQNPRL FHGTIAENIR IGRPDADMAA LREAAKNAHA LEFIEALPQG FDTPVGDLGQ
GLSGGQIQRV ALARAFVKNP PIFILDEATA SLDMENESLV LDAMQRLIQG RTAIVIAHRL
AMAERADQIL VMDAGKVVEA GTHNALLAAG GVYARLAAAY RGDHA
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