Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1105 |
Symbol | |
ID | 6877076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1080929 |
End bp | 1081696 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788985 |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_002219554 |
Protein GI | 198283233 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.919918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAAAG AATCCCTTTA TGGTATCCAT GCGGTCAGCG CGGCACTGGA TGCAGAGGAA TTGCTGGAAC TCTGGGTTGC CGTCGAGCGG CGGGCTGATG AGCGCATTGC GCCTTTAGTG CAGAAGGCTG CAGAACAGCG TCTGCCGGTG CAGGAATGGC GGAGTGTGGC GCTCGGCCGG AAACTGAACA CCGACCGGCA CCAGGGCGTG GGCGGCTTGC TGCGCGCCTT TCCCGGACAA GATTTCGAGG CGATCCTCGC GCAACTGAAC GGCTGTGGTT TTTTGTTGGT GCTGGATGGT GTGCTGGATC CCCATAATCT TGGGGCATGC CTGCGCAGTG CGGAGGCGGC GGGGGTCGAC GCGGTGATTC TGCCCCGGGA TAACGCCTGC CCGGTCAATG CTACCGTGCG CAAGGCGTCC GCCGGATCGG CGTCACGCGT TCCGGTCTGT ACCGTGACCA ATCTGTCGCG CACTCTGTCC TCGCTGCAGG AGGCGGGATT CTGGCTGGTC GGGATGGCGG GGGAGGGTTC CCGGAGCCTT TATGCGCTGG ACCTCGACAT GCCGCTAGTG ATGGTGATGG GGGGTGAGGA GAAGGGCTTG CGCCGCCTTA CCCGGGAGCA TTGCGATTAC TTGGCGCATA TTCCCATGAT GGGAGCCATC GAAAGCCTGA ACGTGTCCGT AGCTACCGGG ATCTGCCTCT TCGAGGCGGC CCGGCAGCGG CGGAATCTGT CCCCCGCGCG GCCTGTCGCG CAGGAAAAAT CCGCTTGA
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Protein sequence | MTKESLYGIH AVSAALDAEE LLELWVAVER RADERIAPLV QKAAEQRLPV QEWRSVALGR KLNTDRHQGV GGLLRAFPGQ DFEAILAQLN GCGFLLVLDG VLDPHNLGAC LRSAEAAGVD AVILPRDNAC PVNATVRKAS AGSASRVPVC TVTNLSRTLS SLQEAGFWLV GMAGEGSRSL YALDLDMPLV MVMGGEEKGL RRLTREHCDY LAHIPMMGAI ESLNVSVATG ICLFEAARQR RNLSPARPVA QEKSA
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