Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1102 |
Symbol | |
ID | 6877073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1078847 |
End bp | 1079887 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788982 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002219551 |
Protein GI | 198283230 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAAA ACAGTCAAAA GTCAACCAGC TACGCCAACT TGGGCACGTT CGTGTTGCTG CTGGTCTACG CTGGCGCCGC ATACACCCTC AGCCCCTTCG CAGGTCCCCT GCTGATGGGG GCGGTGCTGA CGACGGTGGG CTGGCCCTGG CAATTGCGTC TGGAGCGTGC CTTCCATATG CCGCGCTGGC TGGGCTCCCT TGTCCATGCC CTGGTGTGGG TGGCGATCAT CATCATTCCC GCGGTCATCA TTGTAGATTC GGTCCTGCCC CAGTTGGCAC TGCTGATTTC CCGCTGGCAG TCGGGTGGTC CCCTTGTCGT CGTGCCGCCG GAGGTGATGA AAATTCCCTA TGTGGGACAC TGGTTGCTCA GCCACCTGCG CGGGCTGAAC GGTGCCTACC TCTCCGCGCT GGTAAGCACA CATTCCGGCA TCATCACCGA TTCTCTGAGC CAACTCTGGA TATTCACCCT GCACACGTTT TTTGCCGCGC TGACGGTGTT TGCGCTGGCC CTCCATGGCG AACGTCTGAC GGAGGCGTTG CGCCTTGGGG CCGGACAAAT ATGGGGCAGT GATCGCGGCG ATCGTTTATT GGCCGCCAGT CGGGATGCGG CGCGCTCGGT GTTGATCGGC CTCATCGGTG TAGGTGTGGT AGAGGGCATG TTTATCGGCA TTGCCTACGC TGTTGCCGGA CTGGGTATGT GGCCCCTCTG GCTGGTTGCC ACGGCGCTGA TATCGCCTAT CCCTTTCGGG GCGACGGCGG TAGTCGGCGC TGCCACCCTG TGGCTCGCTT TTACGGGGCA TTGGTTTGCC GGTCTGCTCG TCCTGATCTG GGGGCTGATC GTGATTACCG CGGCGGACCT GGTGGTCCGC CCGCTGCTCA CCGGTTCGCA GACGCAAGCC CCTTTCTTTC TGGTGTTCTT CAGCATCCTT GGCGGCGCCG AGGCGTTTGG TCTGATCGGC CTGATTATCG GACCCATTCT GGTGCTGCTG GCGCGTGGCG TGTGGCGCGC ATGGGAGCGG CGCGTTCGCC TTCAGGAGTA G
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Protein sequence | MVQNSQKSTS YANLGTFVLL LVYAGAAYTL SPFAGPLLMG AVLTTVGWPW QLRLERAFHM PRWLGSLVHA LVWVAIIIIP AVIIVDSVLP QLALLISRWQ SGGPLVVVPP EVMKIPYVGH WLLSHLRGLN GAYLSALVST HSGIITDSLS QLWIFTLHTF FAALTVFALA LHGERLTEAL RLGAGQIWGS DRGDRLLAAS RDAARSVLIG LIGVGVVEGM FIGIAYAVAG LGMWPLWLVA TALISPIPFG ATAVVGAATL WLAFTGHWFA GLLVLIWGLI VITAADLVVR PLLTGSQTQA PFFLVFFSIL GGAEAFGLIG LIIGPILVLL ARGVWRAWER RVRLQE
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