Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1097 |
Symbol | |
ID | 6877068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1074062 |
End bp | 1075750 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788977 |
Product | ABC transporter related |
Protein accession | YP_002219546 |
Protein GI | 198283225 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGACG CTGGCGCCCG CGCCGCGCTC CGTTCTCCCA GCTTTTACCG CCTGCTCAGT CTGGTTCGCG CGTACCGGGG ACGCATCGCC GTCGCCATGC TGTTCATGGT GATTTCGGGC GCGGCCACCG GCGGAGTGGC CTACATGATC AAGCCGGTCC TCGACCGGAT ATTCATCGAC CGCAACGCCG ACATGCTTAT CTGGCTGCCC CTGGGTGTCA TCGCGATCTA CGCGGTCAAA GGGAGCGCCG ACTACCTGCA GGCCATCACC CTCGCCCGGG TGGAAGAAGA CATTTTGCGC CGCCTGCGCG AACGTCTGTT CGCCCACACC CTGCGTCTGC CCCTCGGCGT CCTGATCGAT AACAGTCACG GCAGCACCCT GTCCCGGATG AGCCTGGACC TGACCTTGTT GCAGCAGGGG CTGTCGGTGC TGGCGCGCTT CTTTCTATCC ACCTTCCAGA TCATCGCGCT GATGGCGGTG GTATTTTACA TGAGCTGGAA GCTGGCGCTC ATCAGCTTGG TCACCCTGCC CATCGCGTTT TATCCCCTGA TTCGTTTCGG GCAGAAATTG CGCCAGCGCG GCGAGCGCCA GCAGGAGCAG ATGGGCCAGA TCATGGATCA GTTCTCCCAG AGCCTGCGCG GCGCCGAGGT CATCAAAAGT CAGGGCAGTG AAGCCTTCGA GGCACAACGG TTCGGTGTTC AGGCGCGGCG CTATTTCGAC CTGATGATGC AGATCGCCCG TATCCAGAAG GCGACCGTCC CTATCATGGA AATGATCGCC GCGCTGGGCA TCGGGGTCAT CATCTATCTG GGCGGCAGTC AGGTGGTGAA TGGCGACATG ACGACCGGGG CCTTTTTCAG CTTCCTGACA GCGCTCGGGA TGGTCTACGA GCCGCTGCGC CAGCTTTCCT CGGCCAACAA TCAACTGCAG CAGGGACTCT CGGCCGCAGA CCGCCTTTTC GCCTGGCTGG ATCAGCCCGC AGAATCCGGT ACCCGTTCCG CCATCCCGCG CCCCTGGGGC ACCTGGCAGT GCCACGACCT CCAACTGCAG ATGAGTGGTG AAGCGATTTT GCGCGGACTC CAGTTCACCA TACCACCGTT GAGCACGACC GCCATCGTCG GTTCCAGCGG CGGTGGAAAA ACCAGTCTGG CGCGGGTGAT GCTTGGCCTT CTGCCGCCCA GTGGGGGAGA CATCACCGTG GCGGGGCAAT CCATTCGCGA ACTTCCTTCC GACGATTACC GCAGCTATTT CGCCTTTGTC GCCCAGGAGC CTGTACTTTT CACCGGCAGC GCTCTTAGCA ATATCGCCTA CGCCGACGCG CAACCGGACC GCCAACGCGC CGAGGCTGCC GCGCGGCAGG CCCACACCTG GGATTTTCTG GCCACGACCG GCGGGCTGGA CACGCTGATC AAGGGTAATG GCGGCAATCT TTCCGGGGGA CAGCGCCAGC GGCTCGCCAT CGCCCGCGCG CTCTATCTGG ATCGCCCCGT ACTGGTCCTC GACGAGGCCA CCAGCAACCT CGACAGCGAA AGTGAAGAAC ACATCGCGGA GACCCTCAGC GCTCTCCACG GCCGCAAAAC CATCATCATC ATCGCACACC GTCCGCGCAC CACCCGCCTC GCCGATCAGA TCATCCGCCT CGAACGCGGC CGGATCGTGG CGGATGACCA GGGGCACGGG GCCGCATAG
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Protein sequence | MSDAGARAAL RSPSFYRLLS LVRAYRGRIA VAMLFMVISG AATGGVAYMI KPVLDRIFID RNADMLIWLP LGVIAIYAVK GSADYLQAIT LARVEEDILR RLRERLFAHT LRLPLGVLID NSHGSTLSRM SLDLTLLQQG LSVLARFFLS TFQIIALMAV VFYMSWKLAL ISLVTLPIAF YPLIRFGQKL RQRGERQQEQ MGQIMDQFSQ SLRGAEVIKS QGSEAFEAQR FGVQARRYFD LMMQIARIQK ATVPIMEMIA ALGIGVIIYL GGSQVVNGDM TTGAFFSFLT ALGMVYEPLR QLSSANNQLQ QGLSAADRLF AWLDQPAESG TRSAIPRPWG TWQCHDLQLQ MSGEAILRGL QFTIPPLSTT AIVGSSGGGK TSLARVMLGL LPPSGGDITV AGQSIRELPS DDYRSYFAFV AQEPVLFTGS ALSNIAYADA QPDRQRAEAA ARQAHTWDFL ATTGGLDTLI KGNGGNLSGG QRQRLAIARA LYLDRPVLVL DEATSNLDSE SEEHIAETLS ALHGRKTIII IAHRPRTTRL ADQIIRLERG RIVADDQGHG AA
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