Gene Lferr_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1091 
Symbol 
ID6877062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1068924 
End bp1069409 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID642788971 
Productprotein of unknown function DUF520 
Protein accessionYP_002219540 
Protein GI198283219 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTT TTGATGTGGT ATCCGAAGTG GATATGCAGG AAGTGGATAA TGCCCTGCAT 
ACAACGGTGA AGGAAATCAC CACCCGTTAT GATTTCAAGG GCAGCAAGGC GTCGATGGAG
CGGAAGGAAA AGGAGATCAT CCTCGTTGCC GAGGACGAGT ATAAGCTGGG GCAGATGATC
GACCTGCTCT CGGCGCGTCT GGTAAAGCGC GGGGTAGATT TGAAGGCCCT GGAGGTGGGT
AAGGTGGCCG CCGCGGCGGG CGGGATGGAG CGGCAGGTGC TGAGCCTGAA AGTGGGTCTG
GAAACCGAAG TGTCCAAGCG CATGATCAAA TTTCTGAAAG ACGGAAAGTT CAAGGCCCAG
GGCAGTATCC AGGGGGATCA GTTGCGGGTG TCGGGCAAGA GCCGGGACGA GTTGCAGGCG
GCCATTGCCG CGCTGCGCGG TCACGATTTT GGTTTGCCGG TGCAGTTTAC GAACTTTCGG
GATTGA
 
Protein sequence
MPSFDVVSEV DMQEVDNALH TTVKEITTRY DFKGSKASME RKEKEIILVA EDEYKLGQMI 
DLLSARLVKR GVDLKALEVG KVAAAAGGME RQVLSLKVGL ETEVSKRMIK FLKDGKFKAQ
GSIQGDQLRV SGKSRDELQA AIAALRGHDF GLPVQFTNFR D