| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1088 |
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| Symbol | |
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| ID | 6877059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1067066 |
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| End bp | 1068070 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788968 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_002219537 |
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| Protein GI | 198283216 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT TCTTCAGTCA TTACCTGCTC TTCCTTGCCG ACACCGCCAC CATCGTGGTC
GCCCTGCTCG TCGTCGTGGG CGGCATCGCC GCCATCGCCC TGAACAAACG CAAAAGCCCC
GCGTCCGGAC AGGTGCAGGT CACCGACCTG CGCAAGCAAT TAGAACAATC GGGCGAAAAC
GTCCAGCAAT ACCGGCTGGA CAAAAAAGCC CTGAAAATCC ATCGGAAGAC CCTCAAGAAA
GACCGCAAAG ACAGGGCCAA CGACCCTCTT GCCGAAAGCT GCACCTATCT GCTCGACTTC
AAGGGCGATA TCCGCGCCTC TGCCGTCAGT GCCCTGCGCG AAGAAATCTC CGCCATCATC
CAGGCCGCAA AACCCGGCGA CACCGTCCTG CTGCGCCTGG AAAGCGGCGG CGGCATGGTC
AACACCTATG GTCTCGCCTC GGCCCAGTTA TTACGTCTGC GTGCCGCCAA GATTCATCTC
ACGGTGCTGG TCGACGCCGT CGCCGCCAGT GGCGGCTACA TGATGGCGGT CACGGCTGAC
CGTATCGTCG CCAGCCCCTT CGCCCTCATC GGCTCCATCG GCGTCGTCGC CCAGATTCCC
AACTTCCACC GCTGGCTGCA GGATCGCAAC ATCGACTGGG AACAGTTCAC CGCCGGCAAA
TTCAAGCGCA CCGTCACCTT GTTCGGCGAG AACACCGAAA CCGGCCGCGC CAAGCTGCGC
GAAGAACTGG AAGAAACCCA CGCCCAATTC CGCGACTTCG TCCAGCAATA CCGTCCGCAA
CTGGATTTGG AACAAGTCGC CACTGGCGAA GCCTGGCTGG GCAACAAGGC CCGCCAACTC
GGATTGGTGG ATGATCTCGC CACCAGCGAC GAGATCATCC TGGAAGCGGT GCGACAGGGC
AAAGTGCTCG CCCTCCATTA TCAGCGCCAA AAGACACTCC CCCAACGCCT CGGTCTCGCT
GCCCAGCAAA GCTGGGACAA ACTCTGGCAG CCGCCCATCT CCTGA
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| Protein sequence | METFFSHYLL FLADTATIVV ALLVVVGGIA AIALNKRKSP ASGQVQVTDL RKQLEQSGEN
VQQYRLDKKA LKIHRKTLKK DRKDRANDPL AESCTYLLDF KGDIRASAVS ALREEISAII
QAAKPGDTVL LRLESGGGMV NTYGLASAQL LRLRAAKIHL TVLVDAVAAS GGYMMAVTAD
RIVASPFALI GSIGVVAQIP NFHRWLQDRN IDWEQFTAGK FKRTVTLFGE NTETGRAKLR
EELEETHAQF RDFVQQYRPQ LDLEQVATGE AWLGNKARQL GLVDDLATSD EIILEAVRQG
KVLALHYQRQ KTLPQRLGLA AQQSWDKLWQ PPIS
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