Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1084 |
Symbol | |
ID | 6877055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1063523 |
End bp | 1064656 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642788964 |
Product | hypothetical protein |
Protein accession | YP_002219533 |
Protein GI | 198283212 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4966] Tfp pilus assembly protein PilW |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCATG CTGACGGCTC AGAAACGGGT TTTACCCTCA CCGAACTGCT GGTAGCCCTG GTGATCGGCA CCTTGCTGGC GACTGCCGTG TTCACGTTCT TTCTGAACAG CAGCCAGATC ATCACCAACC AGAGCAGCAC TACGGATATG TGGCAGCGGG GACGTAACGC GCTGGCGTTA GTGCGCCAGG CGGTGGAGTC GGCGGGGTTT GGGTTACCAC AGATTTCTGA TTGCCCTAAT GGGATTGCCG CTTATAACAG CAATCAGACT GCTTCGCCTT TTTCTTTGAC GGCTATCACC GCCTCCGTGC AAAGCAGTGG CACCTATGAC CCCACAAACA CCAGCAATAT CAATACGTAT TCATTGATGA CCGTGGCGGG GGGCGCATCA TTTGGCAACG CTCCGGCAGC GCAGATCAGC TCCATTCCGA GTATGGCCTC GCAGCGGGTG TTTTTGACGG CGACAGCATT CATCAATTCT GGGGATATGT TTATTGTACA AATTCCCGGA CAGGCCTGCC TGATGGCACA GGTGACCAAC CTGCTTACTC AAGGCAACGG GATTGGCGTT GTTCATAATT CTGGACTGTC CAATTACAAT CCTTCTGGGG GTTTTCAGAC ATTAGCGGGG GCTATTTATC CTGGCCTTAG CAGCACCGCC TTTGTCGGTG CCAACTTCAT CGACTTGGGC AGCAATAACT TCACCATCAA TCAATTCACC ATTGGTGACA GCGGCGGCAC CGCGACACCG ACCCTCTACC TAACCCAATA TACCGCCAAC CAGACCACCA CATCTACTCG TCAGGCCCTA GCGCGTGGTG TCGTAGATCT ACAATTAGAA TATGGTCTCG GCATTAATGG CGCCATAACA CAATGGGTTC TTCCTGCAAA TTACACGCCG TCGGCTACAC AGCAAATTCT TGCCGTTCGG ATAGCCATGC TTGCACGTAG TACCCGCTAC ATGCCCAATG AAACCAGCCC GGCCAGCTTC ATTATGTTAC CTCACCAAAA TCTAAGCTAT ACCGTTCCGA CATCCAATGG CCCAGGCTGC CTGCAAGGTG ATTGTCGTCA CTATGCCTAC CATCTTTTCG AAAGCGTGGT GCCGGTTCGA AATAATATCT GGGGTGGACC ATGA
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Protein sequence | MRHADGSETG FTLTELLVAL VIGTLLATAV FTFFLNSSQI ITNQSSTTDM WQRGRNALAL VRQAVESAGF GLPQISDCPN GIAAYNSNQT ASPFSLTAIT ASVQSSGTYD PTNTSNINTY SLMTVAGGAS FGNAPAAQIS SIPSMASQRV FLTATAFINS GDMFIVQIPG QACLMAQVTN LLTQGNGIGV VHNSGLSNYN PSGGFQTLAG AIYPGLSSTA FVGANFIDLG SNNFTINQFT IGDSGGTATP TLYLTQYTAN QTTTSTRQAL ARGVVDLQLE YGLGINGAIT QWVLPANYTP SATQQILAVR IAMLARSTRY MPNETSPASF IMLPHQNLSY TVPTSNGPGC LQGDCRHYAY HLFESVVPVR NNIWGGP
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