Gene Lferr_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1079 
Symbol 
ID6877050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1057020 
End bp1057469 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID642788959 
Productprotein of unknown function DUF423 
Protein accessionYP_002219528 
Protein GI198283207 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.871958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAC ATTCGGCAGG ACGGAAATGC GGGATACAGG CCGGAGCATA TTTTGCCATG 
CTCGGGGCGC TGGTGATGGC CCTGGCGGTG ATCGCCGGTG CGGCAGGGGA TCATCTGGTG
GCGGGGAGGG TGGGTGACCG TGCGCTGCAT ATTTACGATA TTGCGAATCG CTTTCAGATT
TATCACGGGC TTGGGCTGCT GCTCATCGGT GTGTTGATCC GCCAGTACGG CAGGCGGCGC
CTGCTCTGCG CGGCGGGACT GCTGATGGCC CTGGGCGTTC TGCTGTTTTG CGGCGGACTC
TATCTGCTGG TGCTGACCGG CTATTCGTTC TGGGCATTTT TCGCCCCCAT GGGCGGGACG
GCGCTGATTT TTTCCTGGCT GCTACTGGCG CTAGGTATCT GGCGTGCCTC CAAAACGCAG
GGGAATGGTG ATGCTGATTG CAACGGGTAA
 
Protein sequence
MAGHSAGRKC GIQAGAYFAM LGALVMALAV IAGAAGDHLV AGRVGDRALH IYDIANRFQI 
YHGLGLLLIG VLIRQYGRRR LLCAAGLLMA LGVLLFCGGL YLLVLTGYSF WAFFAPMGGT
ALIFSWLLLA LGIWRASKTQ GNGDADCNG