| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1072 |
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| Symbol | |
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| ID | 6877043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1047916 |
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| End bp | 1049271 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788952 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002219521 |
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| Protein GI | 198283200 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATT TGCTCAGGCA GTTGCGGGCG GAAATGACAT CGTTGCTGGA CTGTTTCAGC
GCCCCGGCCG TGCTGCTGTG TGCAGATTAC TCCGTTCTCG CCGCCAACCA GGCTTATCGG
CGGGTCTTCG GCGACGGCAA GCCCCTGCAG GGGCGGCGCT GTTACGAAAT CATGGAGGAC
GCCGGCTACG CCTGTCGTCA GGGAGGCAAT CATTGCCCAC TCGACGCCTG CCAAAGCTCC
GGTACCGGCC AGCATGTGGT GCACAGCAAT ACCTCCGGAA ACGCGCAGAT CGATCTCTAC
CCTATCCGTA ATGATAGCGC TAAAGTTGTC TACTTTCTTG AACTGCTGAC CCTGGCGCCG
CAATTGACGG CGTTGCCCGC CCCCGCCATG GTCGGCAACT CCCCCGCCTG GCGGGACGTG
GCCAGGCTTA TCCGCCGGGC GGCGCCCAGT GATGCCGCCG TATTGCTGCT CGGTGAGTCC
GGTACGGGTA AGGAACTGGC CGCTGCGGCC GTACATCAGG CCAGTCACTG TCGGAACGGG
CCTTTTGTAG CGGTGGATTG TTCCGGGTTG TCGGAAACCC TCTTTGAGAG CGAGCTCTTC
GGTCATGAAA AAGGGGCATT TACGGGCGCG CATTCGCGCA AAACCGGTCT GGTGGAGGCG
GCCGATGGGG GCACCCTTTT TCTCGACGAA GTCGGTGATA TTCCGCTCAG TCTACAGGTG
AAACTTCTGC GCCTGCTGGA AACGGGGCAT TTCCGGCGGG TAGGGGGCGT GGAGCCGATC
CGTTCGCAGT TCCGCCTGGT CTCGGCTACT CACCGTCCGC TTGAAAAAAT GGTCGCGGAG
GAGCGTTTCC GGCAGGATCT GTATTACCGT CTGAATACAT TTCCGATCAT GCTGCCCGCG
CTGCGGGAGC GCCTGGAGGA TGTGCCCTTG CTGGCGGAAG TCATCCTGCA ACGGCTGCCG
GTGGCCAGGG GGCTGCACCT TCACGCCGAT ACGCTGGAAC TGCTGCGCCG TTATAACTAC
CCCGGCAACA TTCGTGAACT GCGCAACATT CTCGAGCGTG CGGCGCTACT GGCCGACGAT
GTCTGGATTC TTCCGGAACA CCTGCCTACA AACCTTCAGT ATTTGTCGGT GCAAGAATCC
GGCCCGGCTT CGTCTTTGAC GGGCCGGCAG CCCATACCCG GTGTTGGCGA AATCATTCCA
TTGGCGGATC TGGAAGCACA ATACCTGCGC TGGGCGCGGG GAAATTATGG TGGCGATCGC
CGCGGCCTGG CGCAGCGCCT GGGGGTAAGC GAGCGAACCT TGTACCGCAA GCTGGACGCA
CTGAGGAGTA ATACTGGGCA TGCCGTTGAA TCCTGA
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| Protein sequence | MTDLLRQLRA EMTSLLDCFS APAVLLCADY SVLAANQAYR RVFGDGKPLQ GRRCYEIMED
AGYACRQGGN HCPLDACQSS GTGQHVVHSN TSGNAQIDLY PIRNDSAKVV YFLELLTLAP
QLTALPAPAM VGNSPAWRDV ARLIRRAAPS DAAVLLLGES GTGKELAAAA VHQASHCRNG
PFVAVDCSGL SETLFESELF GHEKGAFTGA HSRKTGLVEA ADGGTLFLDE VGDIPLSLQV
KLLRLLETGH FRRVGGVEPI RSQFRLVSAT HRPLEKMVAE ERFRQDLYYR LNTFPIMLPA
LRERLEDVPL LAEVILQRLP VARGLHLHAD TLELLRRYNY PGNIRELRNI LERAALLADD
VWILPEHLPT NLQYLSVQES GPASSLTGRQ PIPGVGEIIP LADLEAQYLR WARGNYGGDR
RGLAQRLGVS ERTLYRKLDA LRSNTGHAVE S
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