| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1064 |
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| Symbol | |
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| ID | 6877035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1038587 |
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| End bp | 1040470 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788944 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002219513 |
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| Protein GI | 198283192 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.932567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCC GTCCCACGGA TATGGTGAAT ACTATGCAGG ACGCAGCGGT AACCTGCGGC
CCGATCCCCG GCTCACACAA GCGTTACCTC GGTGGCGTGC GTTTCCCGGA ATTGCGCATT
CCCTTGCGGG AGATTCGGCA GAGCGACTCC CGGAAGCGGG ATGGCAGCCT CGAAGTCAAT
CCGGCCATCC CGGTCTATGA TTGCAGCGGT CCCTACACCG ACCCGGACGT GGTCATCGAT
ATTCATGCGG GCCTGCCCGC CATGCGCTGG CAATGGTCGC CGACGGATAC CGCCATCGAA
AGCCGCCCCG AGCCCGGTTC CGCCTATGGT CGCGCCCGTC TGGCGGATGT CCGCACGGCG
GATCTGCGTT TTCATCATCG CCGCGAAATT CGCCGGGCGG CCAACGGCGG CAACGTCTCC
CAGATGCACT ATGCGCGGCG CGGTATCATC ACCCCCGAGA TGGAGTTCGT CGCCATCCGC
GAGAATCAGG GTTTGGAGCA CCTGCGTGCC AGCCATCCGG CGCTGTTTCG CGCCCATCGC
GGCGAGTCCT TCGGCGCGCA GATCCCCGAC ACCATTACCC CGGAATTTGT CCGCGATGAA
ATCGCCCGGG GCCGCGCCAT CATCCCCGCC AATATCAATC ACCCGGAACT GGAGCCGATG
ATCATCGGCC GGAATTTCCT GGTGAAGATC AACGCCAATA TCGGCAACTC CGCGGTCACC
TCGTCCATTG CCGAAGAAGT GGAAAAAATG GTCTGGTCGA TCCGCTGGGG CGCCGATACG
GTCATGGATT TATCCACCGG CAGGCATATT CACGAAACCC GCGAATGGAT TATCCGCAAT
AGCCCGGTTC CCATCGGGAC CGTGCCGATT TATCAGGCCC TGGAGAAGGT CGATGGGAAG
GCCGAAGACC TCACCTGGGA TTTGTTCCGG GATACACTCA TTGAGCAGGC GGAGCAGGGC
GTCGATTATT TTACCATCCA TGCCGGTGTG CTGCTGCGTT ATATCCCGCT GACGGCGAAT
CGTCTTACCG GCATCGTGTC GCGCGGTGGT TCCATCATGG CCAAATGGTG CCTCGCGCAC
CACCAGGAGA GCTTTCTCTA CACCCATTTT GAAGAAATCT GCGAGATCAT GAAGGCCTAC
GACGTGAGCT TCTCCCTCGG CGATGGTCTG CGTCCCGGCT CTCTGGCCGA CGCCAATGAC
GAGGCGCAGT TCGCCGAGCT GCATACCCTG GGTGAACTCA CCCGGATTGC CTGGAAGCAC
GATGTGCAGG TCATGATCGA AGGCCCCGGC CATGTCCCCA TGCAACTCAT CAAGGCTAAT
ATGGAGGAGG AGCTACAGCA CTGTTTCGAG GCGCCGTTCT ACACGCTCGG ACCGCTGACC
ACGGATATTG CCCCCGGCTA TGACCATATT ACCAGCGCCA TCGGCGCCGC GCAGATCGGC
TGGTACGGGA CCGCCATGCT CTGCTACGTC ACCCCCAAGG AGCATCTCGG CCTGCCGGAT
AAAAATGACG TGCGGGAAGG GGCCATCACC TACAAGATTG CCGCCCATGC CGCCGACCTG
GCCAAGGGGC ATCCCGGCGC ACAAGTGCGG GATAACGCCC TGTCCAAGGC GCGTTTTGAG
TTCCGCTGGG AAGACCAGTT TCACCTCGGA CTGGACCCCG AAAAGGCGCG GGAATATCAC
GACGAGACCT TACCCCAGGA AGGCGCCAAG GCGGCGCACT TCTGTTCCAT GTGCGGTCCC
CATTTCTGCT CCATGAAAAT CTCCCAGGAT TTGCAGGAAT ACGCGCAATC CAAGGGTGAA
GATATCGAGA CGGCACGACT GGAAGGCCTG CAGGAAAAGG CAGAGGATTT CAAGCGGCTG
GGGAAGAATA TCTACCTTAG ATAA
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| Protein sequence | MATRPTDMVN TMQDAAVTCG PIPGSHKRYL GGVRFPELRI PLREIRQSDS RKRDGSLEVN
PAIPVYDCSG PYTDPDVVID IHAGLPAMRW QWSPTDTAIE SRPEPGSAYG RARLADVRTA
DLRFHHRREI RRAANGGNVS QMHYARRGII TPEMEFVAIR ENQGLEHLRA SHPALFRAHR
GESFGAQIPD TITPEFVRDE IARGRAIIPA NINHPELEPM IIGRNFLVKI NANIGNSAVT
SSIAEEVEKM VWSIRWGADT VMDLSTGRHI HETREWIIRN SPVPIGTVPI YQALEKVDGK
AEDLTWDLFR DTLIEQAEQG VDYFTIHAGV LLRYIPLTAN RLTGIVSRGG SIMAKWCLAH
HQESFLYTHF EEICEIMKAY DVSFSLGDGL RPGSLADAND EAQFAELHTL GELTRIAWKH
DVQVMIEGPG HVPMQLIKAN MEEELQHCFE APFYTLGPLT TDIAPGYDHI TSAIGAAQIG
WYGTAMLCYV TPKEHLGLPD KNDVREGAIT YKIAAHAADL AKGHPGAQVR DNALSKARFE
FRWEDQFHLG LDPEKAREYH DETLPQEGAK AAHFCSMCGP HFCSMKISQD LQEYAQSKGE
DIETARLEGL QEKAEDFKRL GKNIYLR
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