| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1060 |
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| Symbol | |
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| ID | 6877031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1031399 |
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| End bp | 1034740 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788940 |
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| Product | Non-specific serine/threonine protein kinase |
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| Protein accession | YP_002219509 |
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| Protein GI | 198283188 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.28014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACCA ATAATGACTG GATGAACTGG CACCGCGATG CCAGTGCAAT GCCCACGCTG
GGGACGTACG GTTACGAAGA TATCCGCAAA TGGGTGGGCG ATCTGGAAAT TCGCAAAGCC
CAACCTTACC AGAAGTCCAT CAGCCATCTG GAGCAGCGTG GCAGCACCGA CCTCAGTGCC
CTGGTGCAGG GCACGGCACA TACGCCATAC CGGGTAGACA TCCACCTCAG CCAAGGGCAT
CTGGTAACCC TGTGTACCTG CCCGGTAGGC AGTCGCTGCA AACACGTCAC CGCGGTGCTC
CTCGCTCTGC TGGCCGGTCG TAGCCACGCT GCGCCGACGC CGGCCCCGGC TTTGCGTCCG
CATGTGATGC AATGGCTGAG CGAACTGCGT TCGCATCTGG ATCCGCCCAA ACCCAAGCCG
CCGACTGCCA CTCATACCCT GTACTGGCTG CTGGAACTGA ACAGCCGACG TCATCAGGGG
CCGGTTCTCA GTTGTCGTAA GGCCCGCCTG AACAAAAGCG GAGAATGTAC CGGTCTCACC
CCCTGGTACA ATTTTGAAGG CGCCCAGCGC CGCCCGCCGA GCTTCATCGA CGACGCGGAC
CAGCGTGCTC TGCGCCGTCT GCTGCTGGAA GACCCCTATG CCAGCCAGAC GGGCGAATTC
GATCTCGGCC CCCGCCACGG TGCCGCAGCT CTCACCATAC TCGCCGGTAC CGGACGCCTC
TTCGCCAATT CGCCAGCCAA CCCGTCCCTG CGACTCGGTG ATCACCGGCC TGGCACACTG
GTCTGGAAGG TCAGCAAGGG CGGGGAACAA TATCCGGCAC TGGAAACCAC GCCACCCGCT
ACCAGCTTCC TGCCCCTGGA TGCGACCTGG TACCTGGATG GGAAGACTGG GGAAATCGGC
CCGATCGAGA CGGACCTGCC GACCACGGTC CTGCGCGATC TGCTGCAAGC CCCGCCCCTC
AATGCGCAAG AAGCCATTCT TTTGCGCGAG ATGCTGGAGC AATCGGTGCC CGGTCTCCCC
GCGCCCGTGG CCGATCCCGG ACAGGGCTTA CGGGAAATCG AAGCGCCTCT GCAAGCCCTG
CTCTGGTGCG ACACTCTGGC CCTCCTCGGT ATTCAGGCAC ACCGCAACTA TGCCGGCCAA
TGGAGTCCTA CCTGTCGCTT CGATTATGCG CAGCCCACAT TTGTGTATGG TCCCGCACGC
ATTGCCGTGG ACGACGACAG TGCCATCCAG ACCCTCAACA ATGGTGAGAT GGTTCGGATA
AAACGCGACA GGACAGCCGA AAAACAGGCA CTGCAGGCAC TCGGAAAAAC AGGTCTGAAA
GCTGTCAGTG CCGGCCTTTT CCACAGTCTG TCGCCGCTGC CTCATCCCAT CTACGGGCTA
GCCAGCGAAG CCGACTGGGA CGGGTTCATG TCAACGAGCG TCGAGACCCT CCGCGAGCAG
GGTTGGGAGG TGCGCTGGCC CGATGGCTTT CGTCACTACT TCCTACAGGT GGATGAATGG
GATATGCAGG TAGATGGTGC CGAGGAGGGG TGGCTGGGTC TCGATGTCGG TATCGTGGTG
GACGGCAAGC GGCTGGCGCT GCCCCCCCTG CTCGGCGCCC TCTTCGCCCG CGACCCGCGC
TGGCTGAATC CAGGCGGTCT CGGTACCATT CCCGATGGTG AGCATATCCA CCTGCACACC
CCGGCGGGCG TGCCGATCCA GACCACGGCG GATCGCCTGA AACCTCTGGT CGGAACCCTC
ATCGATCTGT TCAGCCTGGA CGCCGGGGGG CCTTTGCGGA TGTCCGCCTT TGACGCGCCC
CGCATCGCCC GGCTGGTGGA CGGCAACCAG TGGCGTAGTG AAGGGATGGA TGCCGTGCGT
GCTCTGGCTA GATCTTTGCC TCAAAACGGA GAGATCCCCT CCGTCCCACT GCCCGCAGGT
TTTGCCCTCC CCCTGCGCAG CTATCAACAG GATGGGCTTG CCTGGCTGCA ATTCCTGCGC
GAGCATCATT TGGGCGGCAT TCTCGCGGAC GATATGGGTC TCGGCAAAAC CGCCCAGACC
CTCGCCCATC TGCTGCTGGA AAAAGAAAGT GGCCGCCTCA CGGATCCCGC CCTGATCATC
ATGCCCACCT CTCTGATTCA CAACTGGCGA GAAGAGGCGG CACGCTTCAC TCCCGACCTG
CGGGTGCTCT CCCTGCACGG CAAAGAGCGC AGCAGCCGTT TCGCCCAGAT ACCTGACCAT
GACCTGATTC TTACCACCTA TCCGCTGATC TGGCGGGACG TCGAAACGCT CAGAAATCAG
CACTTTCATC TGCTGATTCT CGATGAGGCA CAGATGGTCA AGAACGCGCG GGGCCGCGCC
GCCGAAGCCA TCCGTGAGAT TCCTACCCGG CATCGGCTTG CCCTCACCGG CACCCCCCTT
GAAAATCATC TCGGCGAACT CTGGGCACAA TTCGACTTCT TCCTGCCCGG CTTTCTCGGC
GACCAGCGCA GTTTCCAACG GGTCTGGCGC GGCCCCATCG AGCGCCACGG AGATGCTGAG
CGTCTGGATT TGTTGGCCCG TCGGGTGCGC CCCTTCATTC TGCGTCGGCG CAAGGAGGAT
GTCGCCAAGG AACTCCCCGA GAAGACCATC ATTATCCGCC CCATGGATAT CGAAGGGGCG
CAGCGCGATC TTTATGAAAC GGTACGCAGC GCCATGGATG AACGGATCCG CCAGGAAATC
GCCGCCAAGG GTTTTCAGCG CAGCCAGATC GTCATCCTGG ACGCGATGCT CAAACTCCGC
CAAGTCTGCT GTGACCCGCG CCTGCTCAAG AGTGAAAAGG CGCGAAAGGT ACAGGACAGC
GCCAAACTCG CCCTGCTCAT GGAGATGATT CCGGAGTTGC TGGCGGAAGG TCGCCAGATT
CTGCTGTTTT CGCAATTCAC CGAGATGCTC GCCCTGATCA GTGCACGCCT CGACAAGATG
CATATCCCTT ACGTGCTGCT CACTGGCAGC ACCCAGGATC GCAAGACGCC CATCGACCGC
TTTCAGCGCG GTGAAGTGCC ACTCTTCCTG ATCAGCCTCA AGGCGGGCGG CGTCGGCCTC
AACCTCACGG CGGCAGACAC CGTGATTCAC TATGACCCGT GGTGGAACCC CGCCGCCGAA
AATCAGGCCA CTGATCGCGC CCACCGCATC GGCCAGAAAC GTCAGGTTTT TGTTTACAAG
CTGATTGTTG CCGGGAGCAT TGAAGAAAAA ATCCTGGCCC TGCAGGAGAA AAAGGCCATT
CTCGCCGCAG GTGTGCTGGA GAAAACGCAA AAAGAAAAGC TCCGTTTCGG CCCCGACGAC
CTGGCCTCCC TGCTCGCGCC GCTACCGGAA GTCTTGCGCT GA
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| Protein sequence | MPTNNDWMNW HRDASAMPTL GTYGYEDIRK WVGDLEIRKA QPYQKSISHL EQRGSTDLSA
LVQGTAHTPY RVDIHLSQGH LVTLCTCPVG SRCKHVTAVL LALLAGRSHA APTPAPALRP
HVMQWLSELR SHLDPPKPKP PTATHTLYWL LELNSRRHQG PVLSCRKARL NKSGECTGLT
PWYNFEGAQR RPPSFIDDAD QRALRRLLLE DPYASQTGEF DLGPRHGAAA LTILAGTGRL
FANSPANPSL RLGDHRPGTL VWKVSKGGEQ YPALETTPPA TSFLPLDATW YLDGKTGEIG
PIETDLPTTV LRDLLQAPPL NAQEAILLRE MLEQSVPGLP APVADPGQGL REIEAPLQAL
LWCDTLALLG IQAHRNYAGQ WSPTCRFDYA QPTFVYGPAR IAVDDDSAIQ TLNNGEMVRI
KRDRTAEKQA LQALGKTGLK AVSAGLFHSL SPLPHPIYGL ASEADWDGFM STSVETLREQ
GWEVRWPDGF RHYFLQVDEW DMQVDGAEEG WLGLDVGIVV DGKRLALPPL LGALFARDPR
WLNPGGLGTI PDGEHIHLHT PAGVPIQTTA DRLKPLVGTL IDLFSLDAGG PLRMSAFDAP
RIARLVDGNQ WRSEGMDAVR ALARSLPQNG EIPSVPLPAG FALPLRSYQQ DGLAWLQFLR
EHHLGGILAD DMGLGKTAQT LAHLLLEKES GRLTDPALII MPTSLIHNWR EEAARFTPDL
RVLSLHGKER SSRFAQIPDH DLILTTYPLI WRDVETLRNQ HFHLLILDEA QMVKNARGRA
AEAIREIPTR HRLALTGTPL ENHLGELWAQ FDFFLPGFLG DQRSFQRVWR GPIERHGDAE
RLDLLARRVR PFILRRRKED VAKELPEKTI IIRPMDIEGA QRDLYETVRS AMDERIRQEI
AAKGFQRSQI VILDAMLKLR QVCCDPRLLK SEKARKVQDS AKLALLMEMI PELLAEGRQI
LLFSQFTEML ALISARLDKM HIPYVLLTGS TQDRKTPIDR FQRGEVPLFL ISLKAGGVGL
NLTAADTVIH YDPWWNPAAE NQATDRAHRI GQKRQVFVYK LIVAGSIEEK ILALQEKKAI
LAAGVLEKTQ KEKLRFGPDD LASLLAPLPE VLR
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