Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1056 |
Symbol | |
ID | 6877027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1026454 |
End bp | 1027251 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642788936 |
Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
Protein accession | YP_002219505 |
Protein GI | 198283184 |
COG category | [C] Energy production and conversion |
COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.688665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTG CCAAACCACG CCTTGCGGTG CACAAGTTCA GTTCTTGCGA CGGTTGTCAA TTGGCCTTCC TGAATCTGGG GGAAGACCTG CTGCGGCTTG CCGAGCTGGT GGAGATCGTT CACTTCGCCG AGGCCGGCCC CGTGGACCCG GATGCCGTCG TGGACATCGC CTTCGTGGAG GGGAGTGTCT CCACGCCCGA AGACGAGGAG CGCATCCAGA AAATCCGTAA AAACAGCCGC CACCTTATCA GCATCGGCGC CTGTGCCACC GCTGGCGGCC TCCAGGCCTT GCGCAACTTG GCCGACGGCC CCGGCTGGAT TGCGGAGATC TACGCCCAGC CCGAACACAT CCATAGCCTG GCCACCTCCA CCCCCATCGC CGCCCATGTC CCGGTGGATC TGGAACTGTG GGGCTGTCCG GTGAACGGGC GCCAGGTCCT GGGGGCGGTG CGCGCCCTCC TCTTCGAGGT CGTGCCAGCG CTCGAAAAGG ACAAGGTGTG CCTGGAGTGT AAACGCCATC AAGCGGTCTG CGTACTGGTG GCCAAGGGAC TGCCATGCAT GGGCCCGGTG ACGCTCACCG GCTGCGGGGC GCTGTGCCCC CGTTTCGGAC GCGATTGCTA CGCCTGCTAT GGGCCGGCGG AAAATCCCAA CGCCACGGCA TTGGGGCGAC GGTTGGAGGG ACTCGGCCTG GTGCCGGAGG CCGTCGCGCG GCGATTCCTC TTCATCAACA GCGGCGCCCC GGCCTTTGCC GAGGCTGGCC GCCATTGGCG GGAGCAGGTC CATGACCCAA AGCCGTGA
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Protein sequence | MAAAKPRLAV HKFSSCDGCQ LAFLNLGEDL LRLAELVEIV HFAEAGPVDP DAVVDIAFVE GSVSTPEDEE RIQKIRKNSR HLISIGACAT AGGLQALRNL ADGPGWIAEI YAQPEHIHSL ATSTPIAAHV PVDLELWGCP VNGRQVLGAV RALLFEVVPA LEKDKVCLEC KRHQAVCVLV AKGLPCMGPV TLTGCGALCP RFGRDCYACY GPAENPNATA LGRRLEGLGL VPEAVARRFL FINSGAPAFA EAGRHWREQV HDPKP
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