Gene Lferr_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1053 
Symbol 
ID6877024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1024082 
End bp1024660 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID642788933 
Producthypothetical protein 
Protein accessionYP_002219502 
Protein GI198283181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.308187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGA AACAGCGTCA CATCGCCTGG TTGGTATCCG GCGCCGTCCT GTGCGCCGGA 
ACGGCAGTCA CCGGGGCCAG CGCATCCCCC GTAGACATAC AGTTGAATGT CGGGGCACCA
CCCATCTATG CGGCACCGGG CTATCCGCCG ATGGCGATCG CCACGCCACC CCTGATGATC
TGGTTGAGCA ACCTCGGAGT TTACGCCGCC TATGGCGTGC CTCAGCCCAT TTTCTATCTG
GGCTCAAGCT ACTATTACTA TTACGGTAAC CGCTGGTGGG CCGGGCCGGG CTATCGCGGA
CCATGGCGCC CCATCGCCGC GCCGCCACCC GCGCTCCGTC ACTGGAATTA CCGCGACTGG
CAAAACGTCC AGCGCGATGC CCGGCGCCAT TATCGCGACC CACAGTGGCG CCATTTCCGT
CCGGCGGAAC GTCCGCAACC ACAGTATCGT GGACCGGAGC AGCGGGGCCC CGGCGCCTTT
CGGGGGCCGG AAGGCCACGG ACCTGCGCAG CGACCGGAGG ATCGTGGTGG ACCTGGTCGG
GGACATGACG GCCATGACCA AGGCCACGGT CCTCACTGA
 
Protein sequence
MNGKQRHIAW LVSGAVLCAG TAVTGASASP VDIQLNVGAP PIYAAPGYPP MAIATPPLMI 
WLSNLGVYAA YGVPQPIFYL GSSYYYYYGN RWWAGPGYRG PWRPIAAPPP ALRHWNYRDW
QNVQRDARRH YRDPQWRHFR PAERPQPQYR GPEQRGPGAF RGPEGHGPAQ RPEDRGGPGR
GHDGHDQGHG PH