| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1050 |
|---|
| Symbol | |
|---|
| ID | 6877021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1019865 |
|---|
| End bp | 1020902 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642788930 |
|---|
| Product | recA protein |
|---|
| Protein accession | YP_002219499 |
|---|
| Protein GI | 198283178 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0444945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC AGCGCAGCAA GGCCCTTTCG GCGGCCCTGT CACAGATTGA CAAACAGTTT
GGTAAAGGCG CCGTCATGCG TCTCGGTGAT CATAACGCCA TCAAGGACAT CGAGGTCTAC
TCCACCGGCT CGCTGGGTCT GGATCTGGCG CTGGGTGTTG GCGGACTGCC CCGGGGCCGG
GTGGTAGAGA TCTACGGGCC GGAATCTTCC GGTAAAACGA CTCTCACCCT GCATGCCATA
GCCAGTTGTC AGGCTGCAGG CGGCACCGCC GCCTTTATCG ATGCCGAGCA CGCGCTCGAC
CCAGGCTATG CCCACAAGCT CGGCGTCGAT CTGGAAAACC TCCTGATCTC CCAGCCTGAT
ACCGGCGAGC AGGCCCTGGA AATCGCCGAC ATGCTGGTGC GCTCCGGTGC CGTGGACCTC
ATCGTCATCG ACTCCGTGGC CGCTCTGACC CCCAAAGCGG AAATCGAAGG CGACATGGGC
GATTCCCACG TCGGTCTGCA GGCGCGTCTG ATGAGTCAGG CGTTGCGCAA GCTCACCGCC
AATATCTCCC GGACCAACAC CCTGGTCATT TTCATCAACC AGATTCGCAT GAAAATCGGG
GTGATGTATG GCAGTCCGGA AACCACCACC GGTGGTAATG CCCTTAAATT CTACGCTTCC
GTGCGCCTTG ATATCCGCCG CATCGGCGCG ATCAAAAAGA GCGACGAAGT GGTAGGTAAC
GATACCCGCG TCAAGGTGGT CAAGAATAAG GTCGCACCAC CTTTCCGCGA AGCCGAATTT
GCCATCTATT ACGGTGAAGG CATCTCCCGA CTGTCCGAAC TGGTGGACCT CGGTGTGAAG
TTCGACATCG TCGAAAAAAG CGGCGCCTGG TACAGTTACC AGGGCGAGCG TATTGGTCAG
GGCAAGGACA ATGCCCGCCA GTACCTCAAG GAGCATCCGG AACTGGCGGC CAATATCGAG
CAGCGGATAC GGGCAGCGGC AGCAGGACAC CCCCTGGCCT TTGCCGAAGA GGTGGCAGAG
CCCGCAGCGG TCGGCTAG
|
|---|
| Protein sequence | MDEQRSKALS AALSQIDKQF GKGAVMRLGD HNAIKDIEVY STGSLGLDLA LGVGGLPRGR
VVEIYGPESS GKTTLTLHAI ASCQAAGGTA AFIDAEHALD PGYAHKLGVD LENLLISQPD
TGEQALEIAD MLVRSGAVDL IVIDSVAALT PKAEIEGDMG DSHVGLQARL MSQALRKLTA
NISRTNTLVI FINQIRMKIG VMYGSPETTT GGNALKFYAS VRLDIRRIGA IKKSDEVVGN
DTRVKVVKNK VAPPFREAEF AIYYGEGISR LSELVDLGVK FDIVEKSGAW YSYQGERIGQ
GKDNARQYLK EHPELAANIE QRIRAAAAGH PLAFAEEVAE PAAVG
|
|---|
| |