| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1045 |
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| Symbol | |
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| ID | 6877016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1015688 |
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| End bp | 1016386 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788925 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_002219494 |
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| Protein GI | 198283173 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00233178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCTGC CGCCCCTCAC CCCTGCCACC CTGATCCGTC GCTACAAGCG CTTTCTTGCC
GACTGCGCAT TGGCCAGCGG CGAGATCATC ACCGTGCACT GCCCTAATTC CGGGAGCATG
CGCAGTTGCG CCGAACCCGG TCAGCCCATT CTGATCTCCC AGAGCGGCAA CCCTAAACGC
AAACTTCCCT GGACCTGGGA ACTCTACTGG AGCGGCGCCA GCTGGGTCTG CATCAACACG
CAGCACCCCA ATGCCGTAGT CGCCGAGGCC ATCGCTGCGG GCGATATACC CGCCTTACAA
AATTATGCAC AACTGCGCCG CGAAGTGCCT TACGGCAGTC ATGAGCGGGT GGATGTCCTG
CTCAGTTCCG AAGGCCGGCC GCCCTGCTAC GTAGAGGTAA AATCCTGCAC CCTGCTGGAG
GAAGACGGTG TGATCCGCTT CCCCGATGCC GTCAGCAGCC GCGCCCTGCG TCATCTGGGG
GCATTGACGG AGGTGGTCCG CGGCGGCGGG CGCGCGGTGA TGCTTTTCCT GATCGGCCGG
GAAGACGGTC GGGGTTTTGC GCCCGCAGAC GCCATTGATC CGGCCTATGG GAAGGCACTG
CGCCGGGCAC GCACCGACGG TGTGGAAATT CTGGCCTACC GGACCCGCCT CAGTCCTGAT
AAAATAAGCC TCAGTGTGGC GGAACCGCTT CTCTTTTAG
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| Protein sequence | MNLPPLTPAT LIRRYKRFLA DCALASGEII TVHCPNSGSM RSCAEPGQPI LISQSGNPKR
KLPWTWELYW SGASWVCINT QHPNAVVAEA IAAGDIPALQ NYAQLRREVP YGSHERVDVL
LSSEGRPPCY VEVKSCTLLE EDGVIRFPDA VSSRALRHLG ALTEVVRGGG RAVMLFLIGR
EDGRGFAPAD AIDPAYGKAL RRARTDGVEI LAYRTRLSPD KISLSVAEPL LF
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