Gene Lferr_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1042 
Symbol 
ID6877013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1011563 
End bp1012228 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID642788922 
Producthypothetical protein 
Protein accessionYP_002219491 
Protein GI198283170 
COG category[R] General function prediction only 
COG ID[COG2915] Uncharacterized protein involved in purine metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000125436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTCAT TCCTTCTCCC TGACGCCCGG CGGCGGCGCG ACCGCGCCCT GGGCCTCGCC 
GGTGTCCTGC GCAGCGCCCT GCTGGTGCAA GACATCGCGC GTAATGGCGC ACAACCCGGA
GACCTGCTGC AGACCTGCAT CAGGAGCGTT CTGGCGCTGG ACAGCAAGGA CAGCCTGCGT
GCCCTGGGCG ATATCGACAG CCTGCGTCAC TCTCTGGCGC TGCTCTGCCC GCTGCTGCAA
CGCGGCCCCG GCAACGCCCG GGAGGCCGAA CTGCTGCGCT ACAGCATGGC GCTGACCACC
CTCGGCAAGC GCCTCCTCAA AAACGCCTCG GCCACCCGGC GCGTCCAGGA AGGCGTCGAG
CAGGCCCAAC GCCAGATCGC CCACTTTGCT GATCCGATGC AGCGCAGCAT CGTTGCCGGG
CTCGCCCAGA CGTACACCGA GGCCATCGGC ATTCTCCGCC CGCGCATCAT CGTCAGCGGA
GAGAGCCGTT TCCTGAGCGA CCCGGACGAT GCCGCACGCA TCCGCACCCT CCTCCTCAGC
GGCATCCGTG CGGCCGTTCT GTGGCGGCAG GCGGGCGGCC GTCTGCCCGC CACCATTCTC
GAGCGACGCG CGCTCTGTCA GGAAGCGGAA GAATTACTCG CCACCCATCC TCAGCTTACT
CGATGA
 
Protein sequence
MWSFLLPDAR RRRDRALGLA GVLRSALLVQ DIARNGAQPG DLLQTCIRSV LALDSKDSLR 
ALGDIDSLRH SLALLCPLLQ RGPGNAREAE LLRYSMALTT LGKRLLKNAS ATRRVQEGVE
QAQRQIAHFA DPMQRSIVAG LAQTYTEAIG ILRPRIIVSG ESRFLSDPDD AARIRTLLLS
GIRAAVLWRQ AGGRLPATIL ERRALCQEAE ELLATHPQLT R