Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1033 |
Symbol | |
ID | 6877002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1002150 |
End bp | 1004585 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642788911 |
Product | ATP-dependent protease La |
Protein accession | YP_002219482 |
Protein GI | 198283161 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0951111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000189689 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCAAAA TCGATAGAAG TCTCCTGGTG GAAGAGGAAG CACAGATGGT GCCGGTGTTG CCTCTGCGCG ATGTTGTGGT GTTTCCGTTC ATGGTAATCC CGCTTTTCGT GGGGCGGGCA AAGTCGATTC GCGCCCTGGA AGATGCGATG TCTGGTGAAA AGCAGATTCT GCTGGTATCG CAAAAAAATG CCGCGGACGA TGACCCTCAA CCGGAGAATA TTTACCGGAT CGGTACGCTG GCGACGATTC TGCAGTTGCT CAAGTTGCCC GATGGTACGG TCAAGGTGCT GGTCGAAGGT ACGGACCGGG CTAAAATCGT ATCTTTCCTG CCGGCGGAGG AATCCCTGCG CGCTCAGGTA CAGATCGTGG CCAGTGGTGC GGCAAATGAT CGTGAGCTGG AAGCGCTCAT GCGTTCGGTC AGCGCCCAGT TCGAGGCCTA TGTCAAGCTG AACAAAAAAA TCCCCCCGGA GATTCTATCC ACCCTGGCGA GCATGGATGA TCCCGCACGA CTGGCCGACA CCGTTGCGGC CCATCTCGGC CTCAAACTCG AAGAAAAGCA GGAAATTCTG GAGAAGGCGG ACACCCGCGC CCGGCTGGAG CATCTGCTGG GCATGATGGA GTCTGAAATC GACCTGCTGC AGGTGGAAAA GCGCATCCGC GGTCGGGTCA AGCGGCAGAT GGAAAAGAGT CAGCGCGAGT ATTATCTGAA TGAGCAGATG AAGGCTATTC AGAAAGAGCT GGGTGATCTG TCCGAAGAGG GCGGTGGTGA GTTGGATGAG CTGGCACGTA AAATCGACAA GGCTGGGATG CCGAAGGATG TACGGGCCAA GGCCGACGCC GAGTTGAAAA AACTGCGGAT GATGAGCCCC ATGTCGGCAG AGGCAACCGT GGTGCGCAAC TATATCGACT GGCTGGTGGG GGTGCCGTGG CGTAAACGCA GCAAAATCAC CAAGGATCTC AAGCGGGCCA AGGCCATTCT CGATGCGGAT CATTACGGCC TGGAAGACGT CAAGGAGCGC ATTCTCGAAT ATCTTGCCGT ACAGGAACGG GTCGGCAACA GCCGCGGTCC CATCCTGTGT CTGGTGGGTC CCCCCGGCGT GGGCAAGACC AGCCTGGGGC GCTCCATCGC TGCGGCGACC GGACGTAAAT TCGTGCGGAT GTCCTTGGGT GGTGTGCGCG ACGAAGCGGA AATCCGCGGA CATCGGCGCA CCTACATCGG GGCCCTGCCG GGTAAAATCA TCCAGAGCCT GGCCAAGATT GCTACGCGCA ATCCGCTGAT GTTGTTGGAT GAAGTGGATA AGATGGCGAT GGATTTCCGG GGGGATCCGG CCTCCGCGCT TCTGGAAGTG CTGGATCCCG AGCAGAACGC GACGTTCAGC GACCATTACC TGGAAGTGGA CTTCAATCTG TCCGAGGTGA TGTTCGTTAC CACGGCGAAC ACACTCAATA TCCCGGCCCC ATTGATGGAC CGCATGGAGG TAATCCGGAT CTCCGGATAC ACCGAAGACG AAAAGATCCA CATCGCCACC AAGTATCTTC TGCCCAAGCA GATAGAAAAG GCGGGGTTGC AGGACGGGGA AATGCAGGTG TCCCAAACCG TCATCCGGGA TATCATCCGT TACTACACGC GGGAAGCGGG TGTGCGTAAT CTGGAACGGG AACTCGCACG CATTTGCCGG AAGGTGGTAA AGGAACTCCT GCTCGACAAA AAGCGCACGC GTGTGCAGGT TTCGGATCGC AATCTGGACA AGTATCTCGG GGTGCGCCGC TTCGACTTTG GCAAGGCGGA AAAGGAAAAC CGTATCGGTG AGGTCACCGG ACTGGCCTGG ACTGAGGTGG GTGGTGAGTT GCTGAGTATC GAGGCGGTGG TCGTGCCGGG TCGCGGCAAG CTGCTGATCA CCGGTAAGCT GGGCGATGTC ATGCAAGAAT CCATCCAGGC GGCCATGAGT GTGGTTCGTG CGCGGTCGCG GGCGCTGGGC ATTCCCGCAG ATTTTTACCA GAACCATGAC TTCCATATCC ATGTGCCGGA AGGCGCCACG CCAAAAGACG GGCCCAGCGC AGGCATCGGC ATGGCCACTG CCTTGGTATC GGCACTGACC AATATTCCGG TACATGCCAC GGTCGCCATG ACCGGGGAGA TCACGCTGCG CGGCGAGGTC CTGCCCATCG GTGGGTTAAA GGAGAAGTTG CTTGCGGCAC ATCGCGGCGG CATCAGTACG GTCTTGATTC CGGCGGAGAA TGAAAAGGAT CTGCAGGAAA TCCCCAAAAA CGTGCGTGAT GCGCTGACCA TCAAGGTGGT GCGGTGGATT GACGAGGTTC TGGCGATCGC GCTGGAGTCT TCGCCGACAC CTTTGCCGCC TGAAAGCGGC GGCGACGTGC TGGTTGGTGT GGTGCCCGGC AAAGAGTCTT CCGAGGACAA GGCCATGGCA CATTAG
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Protein sequence | MAKIDRSLLV EEEAQMVPVL PLRDVVVFPF MVIPLFVGRA KSIRALEDAM SGEKQILLVS QKNAADDDPQ PENIYRIGTL ATILQLLKLP DGTVKVLVEG TDRAKIVSFL PAEESLRAQV QIVASGAAND RELEALMRSV SAQFEAYVKL NKKIPPEILS TLASMDDPAR LADTVAAHLG LKLEEKQEIL EKADTRARLE HLLGMMESEI DLLQVEKRIR GRVKRQMEKS QREYYLNEQM KAIQKELGDL SEEGGGELDE LARKIDKAGM PKDVRAKADA ELKKLRMMSP MSAEATVVRN YIDWLVGVPW RKRSKITKDL KRAKAILDAD HYGLEDVKER ILEYLAVQER VGNSRGPILC LVGPPGVGKT SLGRSIAAAT GRKFVRMSLG GVRDEAEIRG HRRTYIGALP GKIIQSLAKI ATRNPLMLLD EVDKMAMDFR GDPASALLEV LDPEQNATFS DHYLEVDFNL SEVMFVTTAN TLNIPAPLMD RMEVIRISGY TEDEKIHIAT KYLLPKQIEK AGLQDGEMQV SQTVIRDIIR YYTREAGVRN LERELARICR KVVKELLLDK KRTRVQVSDR NLDKYLGVRR FDFGKAEKEN RIGEVTGLAW TEVGGELLSI EAVVVPGRGK LLITGKLGDV MQESIQAAMS VVRARSRALG IPADFYQNHD FHIHVPEGAT PKDGPSAGIG MATALVSALT NIPVHATVAM TGEITLRGEV LPIGGLKEKL LAAHRGGIST VLIPAENEKD LQEIPKNVRD ALTIKVVRWI DEVLAIALES SPTPLPPESG GDVLVGVVPG KESSEDKAMA H
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