| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1030 |
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| Symbol | |
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| ID | 6876999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 998777 |
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| End bp | 1000081 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788908 |
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| Product | trigger factor |
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| Protein accession | YP_002219479 |
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| Protein GI | 198283158 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000130547 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAGA AGGATCAGTT CATGCAAATT TCGACACCGG AGGCTGCGCC TCTGGAAAGA
CACATCCATG TGACCATTCC CGCCAGCGAA GTGGAGAGCG GGGTTTCCCA GCGTCTGCGT
AACAAGGCCC GCTCCGCACG TTTGCCGGGT TTCCGGCCCG GCAAGGCGCC CATGACACTC
ATCGAACGCC ATTATGGTTC CGATGCCCTG ATGGAGACCT TCGACCATCT TATCAACGAA
CGCTATTCTC AGGCGGTGCG TGACGAATCT TTACGTCCGG TTGGAAGACC GGAAGTGCAG
GTCGAGAAAG GTGGCCGCGG CGAGGACCTC GTGTTTACGG CCGTGGTAGA GGTATATCCC
GAATTTGATC CGCAGGTGCC GGACGCCACC GTTATCCGCA AGACGGCTGA AGTGACGGAT
GCTGACGTGG ATGCCACCAT AGATATCATG CGTCAGCAGC GGCGTTTTTA TGTGTCCGCC
GAGCGTCCTG CCCAGGACGA AGATCGGGTC ACCGTGGATT TTCAGGGGAC CATCGATGGT
GTCCCCATGG CGGGTGGCGA TGTGACTAAT TATTCCGTGG TGCTGGGCTC CGGCCGCTTG
CTGCCGGATA TCGAACAGGG ATTGCTGGGG ATGTCCGCGG GAGAAGACCG GACCGTCGCG
GTGCAGTTTC CGGCAGAATA TCATGTGGCG GAGCTCGCCG GCCAAGCCGC CCAGTTCCAT
CTGCAGGTCC GGGAAGTGGC GGCGCCCCAG TTGCCCGAAG TGGATGCGGC TTTTGCCCTG
GCGCTGGGTA TCGAGGATGG AGACGTTGCC GTATTACGGC AGGAAGTGCG GGAAAATCTC
GAACGTGAAG CGCAGCGGAT CAGCCGCGGC CAGGTAAAAG CGCAGATTCT GGACCTGGTA
GTGGCGAGCA ACCACCCCGA TTTGCCCAGG CAAATGATCG GGCAGGAGCT GGAGCGTTTG
CAAAAAGACG CCAATGCAGC GGCCGGTGGC GATCTGGACG CGCTGGCCAG GCGCCGGGTG
GTGCTCGGCC TGGTGTTGTC GGAAATCGTC CGGCGTGAAA AGCTGCGGGC ATCCCCGGCG
GAAGTCACTC AGGTTATCCG GGATATGTCC GAGCAGTATG AAGACCCGGA ACAGTTCATA
AGCTGGTACC GTAGTAATCC CGAGCAGATG GAGCAGGCCG AAGCCCTGGT GCTGGAAGAC
AAAGTGGTGG CATGGCTTCT GGAGCGTGTT AAAGTGAGTG ACGAGGCCGT CAGCTTTAAC
CAGCTCATCG GCCGGGCGCC GACAGGTGAA ACAAACGCGG AATAA
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| Protein sequence | MQKKDQFMQI STPEAAPLER HIHVTIPASE VESGVSQRLR NKARSARLPG FRPGKAPMTL
IERHYGSDAL METFDHLINE RYSQAVRDES LRPVGRPEVQ VEKGGRGEDL VFTAVVEVYP
EFDPQVPDAT VIRKTAEVTD ADVDATIDIM RQQRRFYVSA ERPAQDEDRV TVDFQGTIDG
VPMAGGDVTN YSVVLGSGRL LPDIEQGLLG MSAGEDRTVA VQFPAEYHVA ELAGQAAQFH
LQVREVAAPQ LPEVDAAFAL ALGIEDGDVA VLRQEVRENL EREAQRISRG QVKAQILDLV
VASNHPDLPR QMIGQELERL QKDANAAAGG DLDALARRRV VLGLVLSEIV RREKLRASPA
EVTQVIRDMS EQYEDPEQFI SWYRSNPEQM EQAEALVLED KVVAWLLERV KVSDEAVSFN
QLIGRAPTGE TNAE
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