Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1023 |
Symbol | |
ID | 6876992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 991956 |
End bp | 993257 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788901 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_002219472 |
Protein GI | 198283151 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00127553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000467084 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTCGAT ATCTCGTTCG TCCAGGCAGT CGGCTTGCCG GCCGTTTCCC GGTCCCGGGA GACAAATCCA TTTCCCACCG TGCGGTCATT CTCGGGGCGC TTGCTGAAGG TGTCACTGAA GTGGAGGGGT TGCTGGAGGG CGCCGATGTG CTGGCCACCA TCGCCGCTTT TCGCAGCATG GGGGTGCAGA TGGAAGGCCC CGATAAAGGG CATCTGCGCA TTCATGGGGC TGGCCTGCAG GGGCTGCGCG CGCCCGTTGT TCCTCTGGAT TGCGGGAATT CCGGTACCGC CATGCGTCTC TTGGCGGGAG TGCTGGCCGG ACAGCCTTTC CCCAGCACCC TGGTTGGCGA CGCCAGTTTG CAGAAGCGGC CCATGGGCCG CATTCTGAAC CCGTTGCGTG CCATGGGCGC GGAAATCGCC GCCCAGGATG GCAGGGCACC TTTACATATT CATGGGCGGC CCCTGCACGG CATCGACTAT GCCCTGCCGG TGGCGAGCGC CCAGGTCAAA TCCGCCGTGT TGTTGGCCGG ACTGTATGCC GACGGACAAA CCTGCGTGAC CGAGCCCGCA CCCACCCGCG ATCACAGCGA GCGGATGCTG CAAGGTTTTG GCCAACCGGT GGAGCGTCAT GGCCCGCGCG CCTGCCTGCG CGGCGGTGGC CGGTTGTGCG GGCAGGCGCT GCAGGTGCCG GGCGATATTT CGTCGGCCGC GTTCTTCCTG CTCGGCGCCA CCATCGCGCC GGGCTCCGAT CTCACCCTGG AAGGAGTTGG TATCAATCCG ACCCGGACCG GTATCATCGA AATCCTCACC CGCATGGGCG CCCGGATCGA TCTGACGGCC TTGCGTGAAG TGGGCGGTGA GCCAGTCGCT GATATCCGCG TTCGCTATGC ACCATTGCAA GGTATCGCTA TCCCACCTCG GCTGGTACCT CTGGCTATCG ATGAATTCCC CGCGCTGTTC ATAGCGGCGG CGTGTGCGAA GGGGCAGACG GTGATTACCG GTGCCGAGGA ACTCCGTGTC AAGGAAAGCG ACCGCATCGC GGTAATGGCT GGAGGGCTGC GCGCGCTGGG TGCTACGGTA GAAGAGCGTG TGGATGGCGC CATTATCAGC GGATCAGCGC TGCTGGGCGG CCGGGTGGAC AGTCATGGGG ATCATCGTAT TGCGATGGCT TTTGCCATGG CCGCACTGGT GGCGCAGGGG GATATGGAAA TCCTGGACTG TGCCAATGTG GCGACGTCCT TTCCGAGTTT TCCCGCGCTG GCGCAGCAGG CGGGGCTGCT GCTGGAGGTG GCAAGCGCAT GA
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Protein sequence | MTRYLVRPGS RLAGRFPVPG DKSISHRAVI LGALAEGVTE VEGLLEGADV LATIAAFRSM GVQMEGPDKG HLRIHGAGLQ GLRAPVVPLD CGNSGTAMRL LAGVLAGQPF PSTLVGDASL QKRPMGRILN PLRAMGAEIA AQDGRAPLHI HGRPLHGIDY ALPVASAQVK SAVLLAGLYA DGQTCVTEPA PTRDHSERML QGFGQPVERH GPRACLRGGG RLCGQALQVP GDISSAAFFL LGATIAPGSD LTLEGVGINP TRTGIIEILT RMGARIDLTA LREVGGEPVA DIRVRYAPLQ GIAIPPRLVP LAIDEFPALF IAAACAKGQT VITGAEELRV KESDRIAVMA GGLRALGATV EERVDGAIIS GSALLGGRVD SHGDHRIAMA FAMAALVAQG DMEILDCANV ATSFPSFPAL AQQAGLLLEV ASA
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