| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1014 |
|---|
| Symbol | |
|---|
| ID | 6876983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 980167 |
|---|
| End bp | 981390 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788892 |
|---|
| Product | methyltransferase small |
|---|
| Protein accession | YP_002219463 |
|---|
| Protein GI | 198283142 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.955984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000107776 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTG CTAACCCATA CCCCATTCTT CGCCTGCGTC CCAAGGAGGA TCGCCGCCTC
CGCGCCGGTC ATCTATGGGT CTACAGCAAC GAAATCGATG TCCAGAAAAC CCCCCTCACC
GCCGTCACTC CAGGCAGCGT CTGCCGGATG GAAGACGCCC AGGGTAAGGC CCTGGGGCTC
GCCCACGTCA ATCCTCATAC CCTGCTCTGT GCGCGCTTGT TGAGCCGTGA CCCGCATGTC
CGCATCGACG AGGGCTTTTA TCGCAGCCGC TTGCAGCAGG CTTTGCGGAT GCGGGAGCGT
CTGTTCGGTG CGCCTTTCTA TCGCCTGGTG CATGGTGAAG GCGATGGTTT GCCGGGCCTG
GTTATCGACC GCTATGAGGA CCATCTGGTG CTACAGGCAG GTAGTCTCGG CATGGATCGC
GATTTGCCCC TGATCACGGC GGCTTTGCAG GGTCTGCTGC GCCCGGCGGG CATTTTGCTG
AAGGCCAGCG GCGCGGCGCG GCGACTGGAA GGGTTGGAAG ACCGCGTCGA AGTCCTTTTC
GGGCATATCC CGGAGCGGCT GGAGGTTTGG GAAAACGACT GTCTGTTCCA GGTTGACCCC
CGCGGCGGGC AAAAAACCGG CTGGTTTTAT GACCATCGCG CCAATCGACG CCGCTTGCGG
GACTTTGCCC AGGGGCGCCG GGTGTTGGAC TGTTTCGCCT ATCTTGGCGG CTTTGCCATC
CCCCTGGCCA AGGCCGGGGC AAGCGCCGTC ACCGCTGTGG ACAGTTCGGC ACCGGCCCTG
GCGATCCTCG AAGAAAACGC CCGACGCAAC GAGGTTGAGG GCTTGCACAG CATTCACGGC
GATGCCATGG AGACGCTGCA TAATTTACGC GACCGCGGTG AGCAGTTCGA TCTCATCGTC
CTGGACCCCC CGGCCCTGAT CAAATCGAAG AAGGATTTCA AGGAAGGCAG CATCGCCTAT
CGCCGTTTCA ACGACATGGC CATGCGCCTG CTGACCCCCG GCGGCATCCT GTTCTCGGCA
TCCTGCTCGC ATCACCTGAG CCGGGAAACG CTGCTCAGCC AGATCGCTTT TGCCGCCCAG
CGTGGGGACT ACCAGATCAT CGGCGAAGGC AGTCAGGATA TGGATCACCC CGTTCACCCG
GCGGTACCGG AAAGCAACTA TCTCAAGGGC TTCTTCATCC ATCGTCGAGA AGAGTTACCC
GAAGAGGCAG AGAAGACCGC CTGA
|
|---|
| Protein sequence | MSSANPYPIL RLRPKEDRRL RAGHLWVYSN EIDVQKTPLT AVTPGSVCRM EDAQGKALGL
AHVNPHTLLC ARLLSRDPHV RIDEGFYRSR LQQALRMRER LFGAPFYRLV HGEGDGLPGL
VIDRYEDHLV LQAGSLGMDR DLPLITAALQ GLLRPAGILL KASGAARRLE GLEDRVEVLF
GHIPERLEVW ENDCLFQVDP RGGQKTGWFY DHRANRRRLR DFAQGRRVLD CFAYLGGFAI
PLAKAGASAV TAVDSSAPAL AILEENARRN EVEGLHSIHG DAMETLHNLR DRGEQFDLIV
LDPPALIKSK KDFKEGSIAY RRFNDMAMRL LTPGGILFSA SCSHHLSRET LLSQIAFAAQ
RGDYQIIGEG SQDMDHPVHP AVPESNYLKG FFIHRREELP EEAEKTA
|
|---|
| |