Gene Lferr_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1010 
Symbol 
ID6876978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp978393 
End bp978851 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID642788887 
Productprotein of unknown function DUF74 
Protein accessionYP_002219459 
Protein GI198283138 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.166066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000062015 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTACCTGC CCGATACCAA GAACGGCACG TCCAGAGTGG GCCCTTGTCG GAACGTGCGG 
AACAGGTTTT ACAGCGGCAG CAGCAACGGG GAACAGCCCA GAACGGTAAA GTCTGGAGGT
ACACCAACGA CGGCATGCGG GCCAGCTACA CGAAAGCCAT TGCGTGTGGT CCGTGTCATT
GGGCCAGTCT ATGGGACTGG TGTCCGGTCC CGCAATCTCA TCGGCAATCT TCTGGGTGGT
GTCCGCGCCC TCTTCGGCGG CAAGCAGGCG GGCTATCTCA ACATGATTGC TCAGACCCGC
GATGATGCCC TGGAACAACT GGCCGAGCAT GCCCGGTCCC TTGGGGCCAA TGCGGTACTG
GGGATGCGCT TTGATTCCGG CGAATTTGAC GCCGGGCAGG GGCAGGCCAT GAATGAGGTC
ACGGCGTATG GGACGGCGGT AGTGGTGGAA GTGCTATGA
 
Protein sequence
MYLPDTKNGT SRVGPCRNVR NRFYSGSSNG EQPRTVKSGG TPTTACGPAT RKPLRVVRVI 
GPVYGTGVRS RNLIGNLLGG VRALFGGKQA GYLNMIAQTR DDALEQLAEH ARSLGANAVL
GMRFDSGEFD AGQGQAMNEV TAYGTAVVVE VL