Gene Lferr_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1001 
Symbol 
ID6876969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp973042 
End bp973554 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content56% 
IMG OID642788881 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002219453 
Protein GI198283132 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000116544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATCG ACCATGCCAC GCTGTCCGAC GTTCGCGCTG TCGCCGAGAT TCATGTCGAT 
GCATGGCGCT CGGCCTACTC GCGAATCCTA CCTGCGGATT ATCTCGCTTC CTTGTCAGTC
GAGAAACGGG AGGCGATGTG GAAGAACATT ATCGAATCTG GGCAAACAGA GATTCTCGTT
GCTAAGGATG GCGGGACCGT TCTTGGCTGG GTGTCGTTCG GTGCTTGCCG AGATAAGGAT
GCACCATCCT CTCAAGCGGA GCTGTGGGCC ATGTATGTGG CACCAAACAG TTGGTTCAAA
GGGGTTGGGC GTCAGCTGTG GCTACGGGCG CGAGAACTCT TGTCTCAGCA AGGCTACAGC
ACGTGTAGCC TGTGGGTATT TACGGAAAAC GAGCAAGCCA TCCGCTTCTA CAAGGCTATC
GGATTCGTGG CAGGCACCCT GCCTCCGCAG GAACTCGAGT GCGGTGGTCA GCAGCTTCAA
GAAGTACGCT ACGTCTGCAG AATTGACACC TAA
 
Protein sequence
MNIDHATLSD VRAVAEIHVD AWRSAYSRIL PADYLASLSV EKREAMWKNI IESGQTEILV 
AKDGGTVLGW VSFGACRDKD APSSQAELWA MYVAPNSWFK GVGRQLWLRA RELLSQQGYS
TCSLWVFTEN EQAIRFYKAI GFVAGTLPPQ ELECGGQQLQ EVRYVCRIDT