Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0989 |
Symbol | |
ID | 6876957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 964213 |
End bp | 965136 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788870 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002219442 |
Protein GI | 198283121 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000179593 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATACCG AGCTTTTGCT GACTTTTCTA ACGGTAGCCC GGTCCGGGGG CATCAGTGCG GCGGCCAGGG TGCTGCACCG CAGTCAACCG GCGGTGACGG AGCGTTTACA GAAACTCACC CAGCAAGTGG GGGAACCGCT CACCATGCGC AGCGGCCGGG GTATTCGCCT CACGCCGGCC GGGGAGGCGC TGCTCTCCAC CGCTCAGCGG ATGCGCGATG TGGTCGACGA ATTTGACGAC ATCGTGTTGC GCCGACAGCG CCTGCAAAAC GGCGTGCTGC GTATCGCCGC GACCAATACG GTGGCCAATT ATTTTCTGCC ACAGCGTCTG GTGGCCTTTC AGCGCCAGTT CCCCGATGTG GAACTCCAAC TGCGCGGTGG CATCATCAAC TGGTCGGACA TCTCGTTGTC CGACTGGGAT TTGTTCTTTC TGGAAGGTGG GCTGGATCTG GAAGGGTTGC CTTCCTACTA TACGGTAACG CCATGGTTAC ACGATGAAAT CATGACGATT TTCCCGGAGG GGCACCCATT GCTGGCGCAA GACGACCTCA CCCTGGAAAG CCTCATGTCC TACCCCATGA TCTGGCGGGA ACGCGCCTCT GGCATTCGCC GCTCCGTGGA GCAGGTGTTT CATGATGCGC ACTTAACGCC CAAACAATCC ATCGAAGTGA CCGGTGTCGA GGCGGTGGGT GCCGCCGTGG ATGCAGGACT GGGCATCGGG TTTGTGACTG CCGCAGCCTT GCGCTTCCGA AAAGACTGGC GCGTCCATGT GCGCCGCTTA CCGTCACCTC ATGGCATTCA ATGGACACTG TATATGGCCC GACCGCAGCC TATTTATCAG TCCCATACCA TCCGGGCATT TCTGCAATTT CTGGATGCGG ACGCAGTGCA TGCTTCAGAC ACCGCAGCCG CATCGCCGCC TTAA
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Protein sequence | MDTELLLTFL TVARSGGISA AARVLHRSQP AVTERLQKLT QQVGEPLTMR SGRGIRLTPA GEALLSTAQR MRDVVDEFDD IVLRRQRLQN GVLRIAATNT VANYFLPQRL VAFQRQFPDV ELQLRGGIIN WSDISLSDWD LFFLEGGLDL EGLPSYYTVT PWLHDEIMTI FPEGHPLLAQ DDLTLESLMS YPMIWRERAS GIRRSVEQVF HDAHLTPKQS IEVTGVEAVG AAVDAGLGIG FVTAAALRFR KDWRVHVRRL PSPHGIQWTL YMARPQPIYQ SHTIRAFLQF LDADAVHASD TAAASPP
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