Gene Lferr_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0985 
Symbol 
ID6876953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp959376 
End bp959837 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content53% 
IMG OID642788866 
Productglobin 
Protein accessionYP_002219438 
Protein GI198283117 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.31019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0030454 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATCA ATATCCAACT CATCCAATCC AGCGGCGCCG CTGTTAAGGA CTTAGGCGTT 
CAGGTTGCCG AGCATTTTTA TAACTACATG TTCACCCATT TTCCTGAAGT GCGGAAAATG
TTTCCAGGGG ACATGTCTGA GCAGCGGGTG CGCCTCTTCA ATTCCGTCAT TCTGATCGCC
ACCAATATCG ACACCATGGA AGTGCTGGTT CCTTATTTGA AAGAACTCGG TATCGGGCAC
ATCAAATACG ATACCCGTCC GGAACATTAC CCCATTGTCG GCAAAAGCCT GCTCAATACC
CTGAAGCATT TCCTGGGTGC GGCCTGGACG CAGGAAATGG CGGAATCCTG GATCGAGGCT
TATAACCTGG CCTCCACCGT TTGCATCGAG GCAGCCTACG AGGCCATGGC CCCTTCCCGC
TTCGTCCCGG TGACCATCGA CGACGTACCT CCCGCCGTCT GA
 
Protein sequence
MAINIQLIQS SGAAVKDLGV QVAEHFYNYM FTHFPEVRKM FPGDMSEQRV RLFNSVILIA 
TNIDTMEVLV PYLKELGIGH IKYDTRPEHY PIVGKSLLNT LKHFLGAAWT QEMAESWIEA
YNLASTVCIE AAYEAMAPSR FVPVTIDDVP PAV