Gene Lferr_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0982 
Symbol 
ID6876950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp956600 
End bp957013 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID642788863 
Productprotein of unknown function DUF488 
Protein accessionYP_002219435 
Protein GI198283114 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0138018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGC AGGGACATAA AATGACTCCG GACCACGCTC AGCGCATTGC CATCACCACC 
TGGCGCGTTT ACGCGCATCC CCTCCCCGCA GGATATCACG TCCTGGCGGA GCGCCTCTGG
CCCCGCGGCT TGCGCAAGGC CGACCTCCCG CTGGACGCCT GGCCCAAAGA TCTCACTCCC
AGCACCGCCC TGCGTCAGTG GTTCGCCCAT GATCCGGTAC GCTGGGATGA ATTCCGCAAA
CGTTATCTGG CGGAACTGGC GGAGCAACAG GAGACTGCCC GCGCGCTCCT GACCCAGGCC
GCTGGTTCGC CCCTGATTCT GCTGTATGCA GCCCACGACC AGGAACACAA CGGCGCGTTG
GTGCTCCGCG ATTTTTTACA GACCTTGGTG AAATCGCCCC CCGATGCGGC CTGA
 
Protein sequence
MNGQGHKMTP DHAQRIAITT WRVYAHPLPA GYHVLAERLW PRGLRKADLP LDAWPKDLTP 
STALRQWFAH DPVRWDEFRK RYLAELAEQQ ETARALLTQA AGSPLILLYA AHDQEHNGAL
VLRDFLQTLV KSPPDAA