Gene Lferr_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0970 
Symbol 
ID6876935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp943487 
End bp943822 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID642788848 
Productprotein of unknown function DUF45 
Protein accessionYP_002219423 
Protein GI198283102 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.473345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.177309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA ATTCAAAGAA GACGGAGTTC AAACAGCGCG TCCGCCACTG GGCCGAAAAG 
CTGGACGTCA AGATCGTCTG GCTGGGGGTG CGTCCGATGC GCAACAAATG GGCCTCGTGT
TCTACCGCCG GCCATTTGAA TTTCAGCGAC GAACTGCCCG CCCTGAAGCC CGAGCTATGG
GACTACGTGA TCGTCCATGA ACTGCTCCAC TTCTCTGTTC CCAACCACGG AAAACTTTGG
AAAAGCCTGA TGCGCTCGCA TCTGGGCGAA TATGAAGCAC ATGAAGGCGA GTTAAAGCGG
ATCGCGGGTA ATCAGGCGCC GCAGCGTACG CGCTGA
 
Protein sequence
MDANSKKTEF KQRVRHWAEK LDVKIVWLGV RPMRNKWASC STAGHLNFSD ELPALKPELW 
DYVIVHELLH FSVPNHGKLW KSLMRSHLGE YEAHEGELKR IAGNQAPQRT R