Gene Lferr_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0966 
Symbol 
ID6876931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp935263 
End bp936330 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content58% 
IMG OID642788844 
Producthypothetical protein 
Protein accessionYP_002219419 
Protein GI198283098 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.248022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.835513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA AGCCAGACAA CAAGGAAACT TCCCTCACAC GGTCCTCCGC GGCGGAATAC 
CTCACCTTCA TCACCGCCAA GGGCGAAGGC GGCGTCGAGG CGATCTACGC GGATGAAGAC
GTCTGGCTCA GCCAGAAAAT GATGGCGGCT CTTTATGACG TGGACGTCCG GACGATCAAC
TACCACCTGC AGAACGTATT CAAAGACAGC GAGTTGGCGG AAGAATCAGT TATCCGAAAA
TTTCGGATAA CTGCCGCCGA TGGCAAAACC TACGACACCG GCCACTACAA CCTCTCCGCC
ATCATCGCCG TCGGCTACAA GGTCAACTCC GAGCGGGCCG TCCAATTCCG CAAATGGGCC
ACCACCGTGG TCAAGGAATA CACCATCAAG GGCTTCGTCA TGGACGACGA ACGCCTCAAG
GCCGGCGGCA CCGTCCTGAC CAAACAGTAT TTCGAAGAAC AGCTCCAGCG CGTCCGCGAA
ATCCGCCTCA GCGAGCGCAA GTTCTACCAG AAGATCACCG ACATCTACGC CACCGCCATC
GACTACGACC GCAGCGCCAC CGCCACCCAG CGCTTCTTCG CCACTGTGCA GAACAAGCTC
CACTGGGCCA TCCACGGCCA CACCGCCGCC GAGGTCATCG TGGACCGGGC CGATGCCGGG
AAACAGCACA TGGGCCTGAC CACATGGAAA GATGCACCCC ATGGAAAAAT CCAGAAATTC
GATGTCAACG TCGCCAAAAA CTACCTGACC GAACCGGAGA TGGCGCAACT CTCGCGCCTC
GTGAACGCCT ACCTCGATGT CGCCGAAGAC ATGGCCCAGC GGCAGATCCC CATGACCATG
CAGGACTGGG AAACACGCCT CAACCGCTTC ATCGCAGCCA CCGACCGGGA AATCCTGCAG
GACGCCGGCA AAGTCACCGC AGAAATCGCC AAGGCCCACG CCGAATCCGA GTTCGAGAAA
TACCGCATCG TCCAGGATCG CCTGTTTGTC TCGGACTTCG ACGCCGAAGT CATGCGGATC
GCAAGGAATG ATGAGGAAAA CGGGAACGAT GATGGAGGTG CGGAGTGA
 
Protein sequence
MKKKPDNKET SLTRSSAAEY LTFITAKGEG GVEAIYADED VWLSQKMMAA LYDVDVRTIN 
YHLQNVFKDS ELAEESVIRK FRITAADGKT YDTGHYNLSA IIAVGYKVNS ERAVQFRKWA
TTVVKEYTIK GFVMDDERLK AGGTVLTKQY FEEQLQRVRE IRLSERKFYQ KITDIYATAI
DYDRSATATQ RFFATVQNKL HWAIHGHTAA EVIVDRADAG KQHMGLTTWK DAPHGKIQKF
DVNVAKNYLT EPEMAQLSRL VNAYLDVAED MAQRQIPMTM QDWETRLNRF IAATDREILQ
DAGKVTAEIA KAHAESEFEK YRIVQDRLFV SDFDAEVMRI ARNDEENGND DGGAE