| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0965 |
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| Symbol | |
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| ID | 6876930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 933698 |
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| End bp | 935266 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788843 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002219418 |
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| Protein GI | 198283097 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.111949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.883741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCT TCATCAGCAG CGTCCAGAAG GAATTCGCCG CCGAGCGCAA GGCGCTGGCC
GAATACCTAT CCGGCGACCC GCTGCTGCGG CGTTTCTTTG AGACGTTTCT CTTCGAGCGC
GATGTCCCCG CTTCCGACCG TCGGCCCGAT GCCGTCTATC TCGATGAAGT CCGGAACTGC
GATCTCTACC TTGGACTCTT TGGAGACGAC TACGGCTGGG AAAACAAGGA CGGCCTCTCG
CCCACCCACC TCGAATTGAA CGAGGCTACC CGGCAGGGCA AGACCCGCCT GATCTTCGTC
AAGGGCGCGG ACGATGATGC CAAGCACCCG AAAATGCGCG CCTTGATCCG CGACGCCGGG
GACACGCTTG TCCGGCGGCG TTTCAATTCC TCCGAAGAAC TTGTCGCCGC CGTCTATGCG
AGCCTGGTCC GGATACTTGA AGAGCGCGAG CTGATCCGTT TGGGGCCCTT CGATGCCACG
TTCTGCCGGA ACGCCACGCT CGACGACCTG GACCAGGACA AGATCACCCG CTTTCTCGGG
CTGGCCCGCC GTGGGCGCAA TTTCCTGTTG CCGGAGGACA CGCCGCCCCA TGAGGTGCTG
ACCCACCTCA ACCTGCTCGA CAAGGGGCGG CCGACCCATG CCGCCATCCT GTTGTTCGCC
AAACAGCCGC AACGCTTCCT GATCACGTCC GAGGTGAAAT GCGCCCACTT CCACGGCTAT
GAAGTGGCCA AGCCCATCCC TTCCTATCAG GTGTACAAGG GCACGGTCTT CGACCTCGTG
GACCAGGCCA AGGATTTCGT GCTCTCCAAA ATCGATCTCT GGGTCGGCAC CCGCGAGCAC
GGCACCCAGG CGCCCACGAA ATACGAAATC CCGCAGGAGG TTGTCGCCGA GGCCATCGTC
AACGCCGTCG TGCATCGCGA CTACACCAGC AACGCCAGCG TGCAGGTAAT GCTCTTCAAG
GACCGGCTGG AAATCTGGAA CCCCGGTTCC CTGCCGCCCA CGCTGACCCT CGAAAAACTG
CGCGGCCCGC ACGCCTCCGT CCCGCACAAC CCGCTGCTCG CCGAGCCCAT GTATCTCACC
AAATACATCG AGCGCATGGG CACCGGCATC CGCGACATGA TCCACCGTTG CCGCAAGGCC
GGGCTTCCCG AACCTGAAAT CCGGCTGGAT GGCGGCTCCT TCGTCCTGAC GATCCGCAGA
CCGGCCTCTG GGTCGGCGAC CCCGTCGGGA CAAGCTAAGG ACCAAGGCGG ACAGCTAGAG
TCACGGCTAG GGTCACGGCT AGAGTCACGG CTAGAGTCAC GGCTAGAGTC ACGGCTAGAG
TCGGCTTTGG CCGCCAAGGT CATGCTGGCC ATCCAACCGC AGCCTCTCGG CAAAGCCGCC
ATTGCGCCGA TCCTCGGACA CAAAACGGTC TCCGGCGAAC TCCACAAGCA GATCAAGCGC
ATGGTGGACG GCGGCCTCAT CGAGCCCACC ATCCCCGAAA AACCCAGCAG TCGCCTCCAG
AAATACCGGC TCACCGCCAA GGGCCAGGCA TTGCTGGCGG AGTTGGAAAA GCCGGGGGGC
AATGCATGA
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| Protein sequence | MRIFISSVQK EFAAERKALA EYLSGDPLLR RFFETFLFER DVPASDRRPD AVYLDEVRNC
DLYLGLFGDD YGWENKDGLS PTHLELNEAT RQGKTRLIFV KGADDDAKHP KMRALIRDAG
DTLVRRRFNS SEELVAAVYA SLVRILEERE LIRLGPFDAT FCRNATLDDL DQDKITRFLG
LARRGRNFLL PEDTPPHEVL THLNLLDKGR PTHAAILLFA KQPQRFLITS EVKCAHFHGY
EVAKPIPSYQ VYKGTVFDLV DQAKDFVLSK IDLWVGTREH GTQAPTKYEI PQEVVAEAIV
NAVVHRDYTS NASVQVMLFK DRLEIWNPGS LPPTLTLEKL RGPHASVPHN PLLAEPMYLT
KYIERMGTGI RDMIHRCRKA GLPEPEIRLD GGSFVLTIRR PASGSATPSG QAKDQGGQLE
SRLGSRLESR LESRLESRLE SALAAKVMLA IQPQPLGKAA IAPILGHKTV SGELHKQIKR
MVDGGLIEPT IPEKPSSRLQ KYRLTAKGQA LLAELEKPGG NA
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