| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0959 |
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| Symbol | |
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| ID | 6876924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 926975 |
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| End bp | 929404 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788838 |
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| Product | plasma-membrane proton-efflux P-type ATPase |
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| Protein accession | YP_002219413 |
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| Protein GI | 198283092 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01647] plasma-membrane proton-efflux P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.30908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC ATCCAGACCC GACAAACACC CCCGGTATTC CGGAAGTCCT CCGGCAATTG
CAGAGCGATC CCCAGCGCGG GTTGTCGGCG GCGGAGGCCG CCCGTCGCCT GGCCCAATAT
GGGGCGAACG CCATTCCCGA AAAACACCTC AGCCCGCTCC GCCAGTTTCT GGGCTATTTC
TGGGGTCCCA TTCCCTGGAT GATCGAAATC GCCGCGGTGC TTTCCGCCGT GGTGGCACAT
TGGGCGGACT TCGCCATCAT CACGACCCTC CTGCTGGTAA ACGCCGGCGT GGGCTTCTGG
CAGGAACACA AGGCTGGCAA CGCCATCGCC CTGCTCAAAC GGAAGCTGGC GCTGCGGGCG
CGGGTCCTGC GCGACGGCCT TTGGCAAGAG ATCGCCGCGC AGGACCTGGT GCCGGGCGAC
ACCATCCTCC TGAAGTTGGG AAACATCATT CCCGCCGACG TGCTGCTGCT GAGCGGCGAT
TACCTCAGTG TCGATCAATC GGTCCTGACG GGGGAATCCC TGCCGGTGGA CAAGGGGCGG
GGGGATAGCG CCTATTCCGG TTCCATCGTG GGCAAGGGCG AGATGCAGGG TGTGGTGACG
GCAACGGGTC TGCAGACCTT TTTCGGCAAG ACTGCGCAAC TGGTGGAGCG GGCGGAGAGC
GTCTCCCATT TCCGCAAGGC GGTGCTCGCC ATCGGCAACT TCCTGATCGT TTCGGCCCTG
GTCCTCATCG CGGTGATCCT CTTCGTGGCT CTGGCGATCC GTCATGAACC CATGATCCGG
ACGATCCTCT TTGCCCTGAT CCTGACCGTG GCCGCCATCC CCGTCGCCCT GCCCGCCGTT
TTATCGGTGA CCATGGCTGT CGGGGCGGAG CGGTTGGCAC GGCTGAAAGC CATCGTCTCG
CGCCTGGTGG CCATCGAGGA GATGGCCGGC ATGGATGTGC TCTGCGCCGA CAAGACCGGT
ACCCTCACCC AGAACCGCCT CACCCTCGGT GAACCCGTGG TGATCGGGGC CCACGATGCA
GATGAGCTGA TCCTCGCCGC CGCTTTGGCC TCCGAGCGGG ATACGGGCGA CCCCATCGAC
ACCGCCGTGC TGGGCGGTTT GCCCGCCTCC GCCCCGTTGG CTTCCTATTC CGTCCTGAAA
TATCAACCCT TTGATCCGGT AAGCAAGCGC AGTGAGGCGG AGGTGGCGGC AGGCGCCGAG
CGCTTTCGCG TAGCCAAGGG CGCCCCGCAG GTCATCCTGG ATCTGGCGCA GCCGGATGTC
GGCACCAGGC AGACGGTCAC CCGCCAGATC GATGCATTGG CGGAAAAGGG CTACCGTACC
CTGGGAGTGG CACGAAAGGA TGGGGATGGC ACCTGGCGCT TCCTCGGTCT CTTGCCCTTG
TTCGATCCAC CGCGGGAAGA TTCGGCGCAA ACCATCACGG CGGGCCAACG GATGGGGATC
GACATCAAGA TGGTCACCGG CGATCACTTG GCCATCGCCA AGCAGGTTTC CACGCTGCTG
CATCTGGGGC AAAACATCGT TCCGGCCGAA GCCCTCTCCA CCGATGTCCG CACCGCGCAG
ACCCAAGCCG AACAGGCCGA CGGTTTCGCC CAGGTCTTTC CGGAGCATAA GTTCGCCATC
GTCAAGGCAT TGCAGGCCAG AAACCATATC GTCGGCATGA CCGGAGACGG CGTCAACGAC
GCCCCCGCGT TGAAGCAGGC CGACGTCGGC ATCGCCGTCA GCGGCGCCAC CGACGCCGCC
CGCGCCGCGG CCGATCTGGT GCTCACCGCA CCCGGCCTGA CGGTCATCGT CGACGCCGTC
GAGGAGGCGC GCAGGATCTT CGCCCGCATG AACAGCTACG CCATCTATCG GATCGCCGAG
ACGATCCGGG TCCTGCTCTT CATGAGCCTG TCGATCCTGG TATTCAACTT CTATCCGGTC
ACCGCGGTGA TGATCGTCAT GATCGCCCTA CTCAATGATT TTCCCATCAT GATGATCGCT
TACGACAACG CCCCCACGGC GCCCCAGCCG GTGCGCTGGG ACATGACACG AGTGCTGATC
ATCTCCATCC TCCTCGGCGT GCTGGGCGTC GTCGCCTCCT TTTCCCTGTT CTGGATTGCC
GAAACCTACC TGCATTTGCC GGTGGGCGTC ATCCGCACCC TGATTTTCCT GAAACTGCTG
GTGGCTGGCC ACCTGACCAT CTTCCTGACC CGCAACACCG GCGCCATCTG GCAGCGGCCC
TGGCCGAGCT GGAGCTTTTT CAACGTCACC ATCGCCACCA AGGTCATCGG CACCTTCGCC
GCCGTCTACG GCTGGCTCAT TCCCCCCATC GGCTGGGGCT ATGCCCTGCT GGTATGGGCC
TACGCCCTGG TCTGGTTCCT GATCAACAGC GGGGCCAAGA TCATCGCTTA TCGGGCGCTG
GACGCCTATC GCAAGTCGTC AACGCGTTGA
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| Protein sequence | MTIHPDPTNT PGIPEVLRQL QSDPQRGLSA AEAARRLAQY GANAIPEKHL SPLRQFLGYF
WGPIPWMIEI AAVLSAVVAH WADFAIITTL LLVNAGVGFW QEHKAGNAIA LLKRKLALRA
RVLRDGLWQE IAAQDLVPGD TILLKLGNII PADVLLLSGD YLSVDQSVLT GESLPVDKGR
GDSAYSGSIV GKGEMQGVVT ATGLQTFFGK TAQLVERAES VSHFRKAVLA IGNFLIVSAL
VLIAVILFVA LAIRHEPMIR TILFALILTV AAIPVALPAV LSVTMAVGAE RLARLKAIVS
RLVAIEEMAG MDVLCADKTG TLTQNRLTLG EPVVIGAHDA DELILAAALA SERDTGDPID
TAVLGGLPAS APLASYSVLK YQPFDPVSKR SEAEVAAGAE RFRVAKGAPQ VILDLAQPDV
GTRQTVTRQI DALAEKGYRT LGVARKDGDG TWRFLGLLPL FDPPREDSAQ TITAGQRMGI
DIKMVTGDHL AIAKQVSTLL HLGQNIVPAE ALSTDVRTAQ TQAEQADGFA QVFPEHKFAI
VKALQARNHI VGMTGDGVND APALKQADVG IAVSGATDAA RAAADLVLTA PGLTVIVDAV
EEARRIFARM NSYAIYRIAE TIRVLLFMSL SILVFNFYPV TAVMIVMIAL LNDFPIMMIA
YDNAPTAPQP VRWDMTRVLI ISILLGVLGV VASFSLFWIA ETYLHLPVGV IRTLIFLKLL
VAGHLTIFLT RNTGAIWQRP WPSWSFFNVT IATKVIGTFA AVYGWLIPPI GWGYALLVWA
YALVWFLINS GAKIIAYRAL DAYRKSSTR
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