Gene Lferr_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0953 
Symbol 
ID6876918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp919682 
End bp920209 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID642788832 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_002219407 
Protein GI198283086 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.749232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG ATCCGCAGGC TATTGAAAAA TCGGCCGCCG CTTCCATCCT TGGTCCCGGT 
GCCGTGCCCA TTGTCCTCCG GGTCAATGGC GAAGCCCACG CCCTGCTGGT CGAACCGCGC
ACCACCCTTG CCGAAGCCCT GCGCGGGCCC CTGGGCCTCA CGGGCACAAA GATCGCCTGT
AATCAGGGGG CCTGCTCGGC CTGCAGCGTC TGGCTCGACG ACCTCGTGGT TGCCTCCTGC
AGCATCCTGG CCATCGAGGT GGGGGAACGG CGGGTCACCA CCATCGAAGG GCTGGCCGCG
GACGAGGGAC TGCATCCCGT CCAGGAGGCC TTCGTCGCCC ATGATGCCGT GCAATGCGGC
TTTTGCACCC CCGGCATGGT GATGAGTTGC GCCGCCCTGC TGGCAGAATA CCCCCACCCG
GGCGAAGCGG AGATCCGGAC CGCCATCAGC GGCCATCTCT GCCGCTGCGG AACCTATCCC
CATGTGATCC AGGCCATTCT GGCCCTGGCC GAGGCGGAAG GAGATTGA
 
Protein sequence
MKEDPQAIEK SAAASILGPG AVPIVLRVNG EAHALLVEPR TTLAEALRGP LGLTGTKIAC 
NQGACSACSV WLDDLVVASC SILAIEVGER RVTTIEGLAA DEGLHPVQEA FVAHDAVQCG
FCTPGMVMSC AALLAEYPHP GEAEIRTAIS GHLCRCGTYP HVIQAILALA EAEGD