Gene Lferr_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0951 
Symbol 
ID6876916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp916282 
End bp917331 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID642788830 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_002219405 
Protein GI198283084 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.567039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCT TCCAGTGGCA ACAGGCTCGG TCGCCGGGGG AAGCCGCAGC CCTGGTCACC 
CAGACCATGG CCGAGGCGAT GCTCACACTG CAAAATACAC CGATCGCACA ACAGGCCATC
CTGGTGAAAG CCGGCGGGGT GGACATGCTG GACCTCATGA AGGAAGGCCT GGTCAATCCC
CTGCGTCTGG TGGACATCAG CCGATTGGCG GAACTGCAGG GCATCTCCCG GGGGAGCGAC
GGCGGTCTGC GCATCGGGGC GCTGACTACC CTGGCCCAGA TCGCCGCTCA CCCGGGTCTC
CGCCAGAGCC ATGCCGCGTT GGCACAAGCG GCCGCCATGG CGGCCAGCCC GCAAATCCGC
AACCGCGCCA CCCTGGGCGG GAATCTGCTG CAACGGCCGC GCTGCTGGTA CTTGCGCTCC
GCCGCCCATC ACTGCCTGCG CAAGGGCGGT GGACACTGCT TCGCCTTTAC GGGCGACAAT
CGCTACCATG CCGTTTTTGC CAACCACGGC TGCGCCATCG TCCATCCCTC GACCCCGGCC
ACCGCGCTCC TGGCTTATCA CGCGCAGGTG GAACTTCTTC ACCCGCAAGG ACAGCGGCGG
CAGGTTTCGC TGGAGGATTT TTTCGTTTTG CCCGAAGCGG ACATGCACCG GGAAAACATT
CTTGCGCCCG GGGAGATCCT GACGGCGGTA TGGCTGCCGC CCCAGATGCA GACCAATCGC
TCCATTTATT TCCAGGTTGC TGAACGGGAA GCCTTCGATT GGCCCCTTGC GGCCGTGGCG
GTGGTCGTGG ATCTCGACGC GGCCGGCCTT TGCCGGGAGG CGAGTATCGT GCTCGGTGCA
GCGGCGCCGG CGCCCTGGCG GGCGAGACAG GCAGAAGCCC TGCTGACGGG GGCGATCATC
CACGGGGAAA CGGCGGAGGC GGCGGGAGAA GCGGCGCTGG CGGGGGCAAC ACCCTTGGCG
CAGAATGCCT ACAAACTACC CTTGCTGGCA ACCTTGGTGC GCCGTGCCGT GCTGGCTGCC
GCCGCCTTGC CGCGGGATCC GCGGCCGTAG
 
Protein sequence
MEAFQWQQAR SPGEAAALVT QTMAEAMLTL QNTPIAQQAI LVKAGGVDML DLMKEGLVNP 
LRLVDISRLA ELQGISRGSD GGLRIGALTT LAQIAAHPGL RQSHAALAQA AAMAASPQIR
NRATLGGNLL QRPRCWYLRS AAHHCLRKGG GHCFAFTGDN RYHAVFANHG CAIVHPSTPA
TALLAYHAQV ELLHPQGQRR QVSLEDFFVL PEADMHRENI LAPGEILTAV WLPPQMQTNR
SIYFQVAERE AFDWPLAAVA VVVDLDAAGL CREASIVLGA AAPAPWRARQ AEALLTGAII
HGETAEAAGE AALAGATPLA QNAYKLPLLA TLVRRAVLAA AALPRDPRP