Gene Lferr_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0943 
Symbol 
ID6876908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp906146 
End bp907066 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID642788823 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_002219398 
Protein GI198283077 
COG category[R] General function prediction only 
COG ID[COG4261] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCCA CAGACCAGGC GTCCATACCC CCTGACCAGC CGTCCTGGGC ACAGCATCCG 
GAGCGCGGAA GCATGGCCAT GTTACGGGTA ATCACCTGGA TTTCCATGAA GCTGGGCCGC
CGCCAGGCCC GCCTCATATT GCATCTGATC GCCGGATACT TTCTCTTGTT TGCGCCAACG
GCCAGACGAT CATCTCGAGC GTACCTCACG CGGGTGCTCG GCCAACCCGC ACATATCTGG
CAAATATATC ACCATTTTCT AACATTCTCC GCAACGATCC ATGACCGCAT TGATTTGCTC
AACAATCGTT TCGATCTCTT TGACATACAT GTACACCAGC CAGAGGCCAT CGAGACGGCC
GTTGCCGCCG GACAAGGGGT ATTGCTTCTA GGGGCACATC TCGGCAGTTT TGAGGTGCTG
AGGGGCGTTG GCCAGCGGCA CCCTGGTCCC CGCGTGGTCA TGGTGATGTA TGAGCAAAAC
GCCCAGCGTT TAAATGCGAT GCTTTCAGCC ATCAATCCGC TGGCCAAACA AAATATCATA
CCCCCTGGCC GTATGGATTC GATGATCCGC GTTCAAGAAG AACTGGAAAA CGGCGCATTG
GTTGGTCTGC TGGGTGATCG CTCCTTTGGT AAGGAGAAGG TGCAGTCCGT TACTTTTCTG
GGCAAGCCCG CCCTTTGGCC CAGCGGGCCC TTCCGGATGG CGGTGATCTT GCGCAGACCG
ATTTTCTTTA TGGTCGGGCT GCATACCGGA CCGGGGAAAT ATGAAATTTT TCTTGAACAA
TTGGCTGATT TCACTGATGT CGAACGAGAC GAGCGGGAAG CAGTGGTGCA TCAGACGATG
GAAAAGTACG TCGGCTTGTT GGAGAAGTAC TGTCATATGG CACCTTATAA CTGGTTTAAT
TTTTTTGACT TCTGGCAATA A
 
Protein sequence
MLPTDQASIP PDQPSWAQHP ERGSMAMLRV ITWISMKLGR RQARLILHLI AGYFLLFAPT 
ARRSSRAYLT RVLGQPAHIW QIYHHFLTFS ATIHDRIDLL NNRFDLFDIH VHQPEAIETA
VAAGQGVLLL GAHLGSFEVL RGVGQRHPGP RVVMVMYEQN AQRLNAMLSA INPLAKQNII
PPGRMDSMIR VQEELENGAL VGLLGDRSFG KEKVQSVTFL GKPALWPSGP FRMAVILRRP
IFFMVGLHTG PGKYEIFLEQ LADFTDVERD EREAVVHQTM EKYVGLLEKY CHMAPYNWFN
FFDFWQ