| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0929 |
|---|
| Symbol | |
|---|
| ID | 6876894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 892178 |
|---|
| End bp | 892702 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642788809 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_002219384 |
|---|
| Protein GI | 198283063 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0748] Putative heme iron utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAA AAATAGAGAT CGTAGCTGCT GAAATAAACT ATCTGATAGC CAATACACAA
ACCATGACTC TGGCCACACT CGATTCAGCA GGTGTCCCGG AGGCGTCTAT GGCACCATTT
ATTCATGATG CGGCAACCCG TCAGTTTTAT ACCGCCGTGA GCGGACTTTC CCCACATACG
GCCTATCTAG CGGCCAAAAA ACCCGTCGGG ATAATGATCA TCACGGATGA ACAGGGTGCC
CCTCAGGTGC TTGGCAGAAA GCGCGTGAGC TATACGTGTG ACGTCCATGA AATCTTCAGG
GAAACCGAAA TTTGTCATAT GCTCTACGAG CAGTTCAAGG CCAAGTTCGG CGGCATCATG
GAACTGTTAT TCCAATTACC GGACTTTCGC CTGTTCGGCC TCGATCCCTT ATCCGGGCGT
TATATCGCGG GATTCGGAGG CGCCTATCTC CTAAAGGGCG ATTCCATCAC CCCGATTGGA
CCGGACAATC TCCGGAAGGG GCCCGGACTG GAACAAGCGC CATAG
|
|---|
| Protein sequence | MMEKIEIVAA EINYLIANTQ TMTLATLDSA GVPEASMAPF IHDAATRQFY TAVSGLSPHT
AYLAAKKPVG IMIITDEQGA PQVLGRKRVS YTCDVHEIFR ETEICHMLYE QFKAKFGGIM
ELLFQLPDFR LFGLDPLSGR YIAGFGGAYL LKGDSITPIG PDNLRKGPGL EQAP
|
|---|
| |