Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0915 |
Symbol | |
ID | 6876880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 877884 |
End bp | 879113 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642788795 |
Product | Guanine deaminase |
Protein accession | YP_002219370 |
Protein GI | 198283049 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02967] guanine deaminase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGAAA AAATATTTAG AGCGCCGATA CTTAACCCGA TAGATGCGAA TACCTGGAGA TTTTATCAGG ATGGTGCTTT AGGTATCGAC CGCGGCATCA TTGTGCGTAT GGGTGATTTC GCTACGGTGT TGAATCAGGT CGACGCTGAT GTGGAAGTAG ATGAGTTGGA TGGTGTTATC GTTCCAGGCT TTGTCGATGT CCATTTGCAT TGGGTACAAC ATCGAGTCAA AGGACGTTTC TCTGGCGAAC TCCTGACCTG GTTGCAAGGG CATATCTGGC CAGAGGAGGC GCGCTATGTC GATACTGATT TGGCCCAGTC TGCGGCGACG CGGTTCTATA GCGATGTATT GCGTGCAGGG ACCGTGATGG GCATGAGTTA TTCCAGCCCG CATGCCGATG CCACGCAGAT TGCGCTGGCG TTGATGCGTG GTGATTGGGT CATTGGTAAC GTGCTGATGG CGATTCATGC GCCCAGTACA TTGACTGATT ACAGCTTACA TGATCCTGAT GCGTTGCATG CATTTATGCG CCAAATGAAT ATGACAAACT ATGCACTGAC TCCTCGTTTT GCACCGAATT TGTCGGCAGC TTCGCTGAAG GCATTGGGAC AGATTGCCGC CGAGGCTCCA TGTTTAATTC AGACACATCT CGCTGAGTCT AACGCGGAGC TGCAATGGGT GAAAGAACTG TTTCCGGATG CAGCGCACTA TACTGAGGTG TATGACCGCG CTGGTCTTCT GACACCCCGG ACGATATTAG GCCACTGCAT TGAAATGCGA GACGAGGAAT GGCGCTGTCT TCGGGCACGT GGCTCCTGGG TGGCGCATTG CCCTACCAGT AATGAGGCGC TCGGCAACCG ACGCATGCCT TTAGAACAAG TACGTGCTTA TAACATTCCA TTTGCACTGG CGAGTGACAT AGGTGGTGGC CCCAGTCATA GCATGCTGCA TGTCATGCAG CGATTTCTGG GTGTACATCG GGAAGCGGGC GTTTCGGTTG CGCCTCAAGA GGCATTGTAT CGTTCTACCA AGGCGGGGGC CGAATGTATG GGCAGAGGAT CTATCGGCGG TGATCTGACG GCGGGAAAAC GTGCCGATTT CGTGCTTTTG CCGCAGAAGC CCGCCGCGGA TTCTGTAGAG GCCTGGTTTG AGGAATGCTT AAGTGGTAAA TCGGCCGATC TGGAACAACG CACTTTGGGA ACCTGGCTCA AGGGTGAGCG GGCGGCCTAG
|
Protein sequence | MMEKIFRAPI LNPIDANTWR FYQDGALGID RGIIVRMGDF ATVLNQVDAD VEVDELDGVI VPGFVDVHLH WVQHRVKGRF SGELLTWLQG HIWPEEARYV DTDLAQSAAT RFYSDVLRAG TVMGMSYSSP HADATQIALA LMRGDWVIGN VLMAIHAPST LTDYSLHDPD ALHAFMRQMN MTNYALTPRF APNLSAASLK ALGQIAAEAP CLIQTHLAES NAELQWVKEL FPDAAHYTEV YDRAGLLTPR TILGHCIEMR DEEWRCLRAR GSWVAHCPTS NEALGNRRMP LEQVRAYNIP FALASDIGGG PSHSMLHVMQ RFLGVHREAG VSVAPQEALY RSTKAGAECM GRGSIGGDLT AGKRADFVLL PQKPAADSVE AWFEECLSGK SADLEQRTLG TWLKGERAA
|
| |