Gene Lferr_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0905 
Symbol 
ID6876870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp867346 
End bp867996 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID642788786 
ProductMethyltransferase type 11 
Protein accessionYP_002219361 
Protein GI198283040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.445237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGA TGGACGCCAC CGCCTACGAC GCCTGGTATG ACACATCTCG GGGGCGGTGG 
ATCGGCACGG TAGAGTTCCG CCTGCTCTCG GGGCTCCTCC ATGCGCAGCC TGGGGATACG
CTCCTGGACG TGGGTTGTGG TACCGGCTGG TTTACCCGCC GTTTTGCCGA AGATGGGCTC
CGCGCCGCCG GTCTGGATTC CAACCAGGAC TGGCTTGCCT TCGCGCGCGC CAAGGGCCCC
CCTGAGATCC GCTGGATAGT CGGAGATGCT CGCGCACTGC CTTTTCCTGA CTACAGTTTC
GACCAGGTGG TTTCTGTTGC GGCACTGTGT TTTGTGGACG ATGAGCGGCG GGCCGTGGCC
GAGATCGTGC GGGTGGCGCG CCGGCGTTTC GCCATCGGCT GGCTCAACCG GACGAGCCTG
CTCTATGCAC AGAAAGGGCA GGGCGGTGGA AGCGGGGCTT ACCATGGGGC GCGCTGGCAT
CGTCCCGACG AGTTGCTCGA TTTTTTCTCC GGCTTGCCGG TACGTCGACT GGCGGTGCAT
TCCGCCATAT TTTTTCCTGC CGGGAACGGG GTGGCGCGAA CGCTGGAACG GCTGCTGCCC
CACACGTTGC CTTGGGGCGG CCTGATAGTC ATTTCGGGGG AGACGGAATA G
 
Protein sequence
MGLMDATAYD AWYDTSRGRW IGTVEFRLLS GLLHAQPGDT LLDVGCGTGW FTRRFAEDGL 
RAAGLDSNQD WLAFARAKGP PEIRWIVGDA RALPFPDYSF DQVVSVAALC FVDDERRAVA
EIVRVARRRF AIGWLNRTSL LYAQKGQGGG SGAYHGARWH RPDELLDFFS GLPVRRLAVH
SAIFFPAGNG VARTLERLLP HTLPWGGLIV ISGETE