Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0884 |
Symbol | |
ID | 6876849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 845259 |
End bp | 845807 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642788766 |
Product | Pilus assembly protein PilP |
Protein accession | YP_002219341 |
Protein GI | 198283020 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT CTTTCCGTAT CATGATGGTG CTTACCGGCA TGGCGTTGCT GGGCGGCTGC TCGGAGAGCG ACAACCTCAG TCATCTTCAG GCTTTTGTAG CCAACGGACC GAAAATCAGC GCGCACGTCA CGCCGCTGCC CAAGACCCCC GCTTACCAGC CGAAGGCTTA TGAAAATCCA ACGAATCGCG ACCCCTTCAC GAGCTTTTCG GAACTGCTAC TTCGCAAGGA GGCCGCCGCC GCCAGCACGG GTCCACGTCC CGCCAGTCAT GGACCACTCC AACCCCTGGA GAAGTACGCG CTTTCCAGCC TGAGCGTGAC CGGCATCGTC CGCGACAGCC AGGGCAAGCT CTGGGCCGTG CTCCTCACAC CGGATCATAA GGTGTATCGC GCCACGGTCG GCAGTTACAT CGGCACCCAT GACGGTCGCA TCGTACATAT TGACGACGGC ATGACGAAGC GGTCGGTTAC CGTCGAACAA TTCATGCCCA ACGCCTTCGG TGGATTCCAA AAAGAGCAGA CTGTCCTGCA GATGCAGAAC AGCCACTGA
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Protein sequence | MKRSFRIMMV LTGMALLGGC SESDNLSHLQ AFVANGPKIS AHVTPLPKTP AYQPKAYENP TNRDPFTSFS ELLLRKEAAA ASTGPRPASH GPLQPLEKYA LSSLSVTGIV RDSQGKLWAV LLTPDHKVYR ATVGSYIGTH DGRIVHIDDG MTKRSVTVEQ FMPNAFGGFQ KEQTVLQMQN SH
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