| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0882 |
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| Symbol | |
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| ID | 6876847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 842324 |
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| End bp | 842863 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788764 |
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| Product | Shikimate kinase |
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| Protein accession | YP_002219339 |
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| Protein GI | 198283018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.314525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA GCATCATCCT CATCGGGCCC ATGGGATCGG GCAAATCGAC CATCGGGCGG
CTTCTGGCCG CCCGCTTGCG TCTTCCTTAT GTGGATAGCG ACGCGCTCAT CGTCCATCAT
ACGGGGGTGG ATATTCCCAC TATTTTTGAG ATCGAGGGGG AATCGGGTTT CCGCGAACGG
GAACGCAAAA TCATCGCCGA CCTCTCCACC TGGAGCGAAC CGATGGTACT CGCCACCGGC
GGCGGCGCCA TACTCGACCC GGCCAATCGA CATCATCTGC GGCAGATGGG CCAGGTCATT
CATCTGGATA TCAGCGTCGA CGAGCAACTC AGACGTATTC GCCATGACCG CAACCGCCCA
CTGCTGCAAA ATACGGACCT TGATTGCCGT CTGAAAACAC TGGCGGAGCA GCGTAATACC
CTGTACCGGG AGACTGCCCA CTGGCGGGTG GTGGGGGACG GTCTGCGCTC GGATCAGGTT
CTGCGCCGGA TACTGCGCCA CCTCCAGCAG CGGGCAGGGC ACCCCCCCGT CCGGGGGTAG
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| Protein sequence | MTGSIILIGP MGSGKSTIGR LLAARLRLPY VDSDALIVHH TGVDIPTIFE IEGESGFRER
ERKIIADLST WSEPMVLATG GGAILDPANR HHLRQMGQVI HLDISVDEQL RRIRHDRNRP
LLQNTDLDCR LKTLAEQRNT LYRETAHWRV VGDGLRSDQV LRRILRHLQQ RAGHPPVRG
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