| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0881 |
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| Symbol | |
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| ID | 6876846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 841124 |
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| End bp | 842218 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788763 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002219338 |
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| Protein GI | 198283017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.100912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGTC TTTGCGTCGA TCTGGGTCAG CGCAGTTACC CCATTCACAC CGGCACAGGC
ATTCTCGCCG ACTCCGCGCT CTTTGCGCCA GCTCTGAGCA AAGGTCCTGT GGCGGTCGTC
ACGGACAGCA ATGTCGCGCC CCTCTATCTG GAGACCCTGC AAAAGACCCT CAAGGCCCTG
GACAAGCCGT CGCTGAGCAT CATCCTGCCA GCTGGCGAAG AGAGCAAATC CCTGGACAAC
ATCCAGGAAA TCGCCGGACG CCTGTTGAGC GCAGGGTACG GTCGCGACTG TACCCTGTGC
GCCCTCGGCG GCGGGGTCGT GGGGGACATC ACCGGTTTTG CCGCGGCGGT CTATCAGAGG
GGGGTGGCCT ACATTCAGGT GCCGACCACC CTGCTCGCCA TGGTGGACTC CTCGGTTGGC
GGCAAGACCG GGGTCAACCA CCCCCTCGGC AAGAACATGA TCGGCGCTTT TTACCAACCG
CAGGCAGTGA TCGCCGACAC CGACACCCTG GACAGCCTGC CCGAACGGGA ATTCCGTTCG
GGCCTGGCAG AAGTGATCAA ATATGGCCTC ATCAACGATC AGGGCTTTTT CTCCTGGCTC
GAAGATCACA TGGATGCAGT GCTGGCCCGG GAGCCGGACG CCCTGACCAA AGTGATCCGG
CACTCCTGCA AGGACAAGGC GGATATCGTG GCGCGCGACG AACTGGAAGG CGGGCTGAGG
GCCATTCTCA ACCTTGGACA CACCTTTGGT CACGCCATCG AGGCGGCGAC GGGCTACGGC
CAGTACCTGC ACGGTGAGGC GGTGGCCATC GGCATGGTCA TGGCGGCGGA TCTGTCGCGT
CGCCTGGATC TGATCCGGGA AAGTGAGCAG GATCGCATCT ACGCCCTGGT CGAAGCCACC
GGATTGCCCA CCCTGGCCCC GGCCCTCCCT GTCGCCGACT ATCTCGGCTT CATGCGCGTC
GACAAGAAAG CGGAGGGGGG GCGGGTGCGC TTCATCCTGC TGCGCGGCAT CGGGAGTGCG
GTCATCACCG GAGAGGTTCC CCCGGCCGCT ATCACTCAAA CCCTTCAGGC GTTCATGGAG
CACGGACATG CATGA
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| Protein sequence | MRSLCVDLGQ RSYPIHTGTG ILADSALFAP ALSKGPVAVV TDSNVAPLYL ETLQKTLKAL
DKPSLSIILP AGEESKSLDN IQEIAGRLLS AGYGRDCTLC ALGGGVVGDI TGFAAAVYQR
GVAYIQVPTT LLAMVDSSVG GKTGVNHPLG KNMIGAFYQP QAVIADTDTL DSLPEREFRS
GLAEVIKYGL INDQGFFSWL EDHMDAVLAR EPDALTKVIR HSCKDKADIV ARDELEGGLR
AILNLGHTFG HAIEAATGYG QYLHGEAVAI GMVMAADLSR RLDLIRESEQ DRIYALVEAT
GLPTLAPALP VADYLGFMRV DKKAEGGRVR FILLRGIGSA VITGEVPPAA ITQTLQAFME
HGHA
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