Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0876 |
Symbol | |
ID | 6876841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 832070 |
End bp | 833134 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788758 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002219333 |
Protein GI | 198283012 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCA CCCTGCAGAA TGACAATTTC CTGCGCGCCT GCCTGCGTCA GCCGGTGGAT CACGTACCCG TCTGGCTGAT GCGTCAGGCC GGGCGGTACC TGCCGGAGTA CCGTGCCACT CGCGCCCGTG CTGGCGATTT TCTCAGCCTC TGCACCACGC CGGAACTGGC CTGCGAGGTC ACTTTACAGC CCATCGACCG CTTCCCCCTG GATGCCGCCA TCCTTTTTTC GGATATCCTG ACCATCCCCT ATGTCATGGG ACTCGGGCTG GAATTTCAGG AAGGGGAAGG TCCGGTTTTT GCGCGCCCCT TGCGCAGCGC TGCCGACATC TCCGCACTCA GCCAGCCCGA TCCGGAAACG GAGTTGCGCT TTGTGATGGA CGCTGTGCGG CTCATCCGCC GCGAGATCGA CGGACGTGTG CCCCTCATCG GTTTTGCAGG CAGTCCGTGG ACCCTCGCCT GCTATATGAT CGAAGGGCGC GGCAGCCGCG ATTTCATCCA CATCAAAGGG CTGCTGTACA GCGATCCGGC GCTGCTGCAC CGGCTGCTGC GCCATCTGGC GCAGTCGGTG ACCAGCTACC TCAACGCTCA GATTGCCGCG GGTGCCCAGG CGGTAATGAT TTTCGATACC TGGGGCGGCA GCCTCAGTAC CCCTGCGTAT GCGGAGTTCT CCCTCGCCTA TATGAGTGAG ATCGTCGCCG CTTTGCAGCG CGAAGCCGAA GACCGCCGAG TGCCGGTCAT ACTCTTTACC AAGGGCGGAG GCAACTGGCT CGAGGCCATG GCCGCGAGCG GCGCCGATGC ACTTGGCCTC GATTGGACGA CGGAATTGGG CCACGCCCGC CAGCGTCTGG GTAACAGCGT TGCGCTACAA GGTAACATGG ACCCCATCGC CCTCTACGGC AGCCCCGAAG GGATTGTCAG GGAAGCGACG CGCATTCTGG AAAGCCACGG ATCGGGGACC GGTCATATCT TCAACCTCGG CCACGGCATC ACCCCGCAGA CCCCCGTTGA ACATGTTGCC ATTCTTGTCG AAAGCGTGCA GAGCTGGCGA CCGAAGACCG CCTAG
|
Protein sequence | MSATLQNDNF LRACLRQPVD HVPVWLMRQA GRYLPEYRAT RARAGDFLSL CTTPELACEV TLQPIDRFPL DAAILFSDIL TIPYVMGLGL EFQEGEGPVF ARPLRSAADI SALSQPDPET ELRFVMDAVR LIRREIDGRV PLIGFAGSPW TLACYMIEGR GSRDFIHIKG LLYSDPALLH RLLRHLAQSV TSYLNAQIAA GAQAVMIFDT WGGSLSTPAY AEFSLAYMSE IVAALQREAE DRRVPVILFT KGGGNWLEAM AASGADALGL DWTTELGHAR QRLGNSVALQ GNMDPIALYG SPEGIVREAT RILESHGSGT GHIFNLGHGI TPQTPVEHVA ILVESVQSWR PKTA
|
| |