Gene Lferr_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0865 
Symbol 
ID6876830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp822479 
End bp822808 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID642788747 
Producthydrogenase expression/synthesis HypA 
Protein accessionYP_002219322 
Protein GI198283001 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.71265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC TCGGAATCAC CCGCAACATT GTCTCCATCT GCAGCGAGCA GGCCCGTGGT 
CGTAAGGTGG TCCGGGTGCG GCTGGAAGTG GGGTTGTTAT CGGGGGTGGT TCCGGACTCC
ATCCGCTTTT GCTTCGACGT GTGCAGTCAG GGCACGCCGC TGGAGGGCGC GGATCTGGAA
GTGCTGGAGA TTCCCGGTGA GGGTGAATGC CGGTCCTGTG GCAAACGTGT CCCTCTCCGG
CAGGTATTCG GGCATTGTCC GTGTGGTGCG GGCGACCTGA TCTGTGTGGC CGGCAAGGAA
CTCAACATCA AGGATATGGA GGTGCAGTGA
 
Protein sequence
MHELGITRNI VSICSEQARG RKVVRVRLEV GLLSGVVPDS IRFCFDVCSQ GTPLEGADLE 
VLEIPGEGEC RSCGKRVPLR QVFGHCPCGA GDLICVAGKE LNIKDMEVQ