Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0864 |
Symbol | |
ID | 6876829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 821407 |
End bp | 822465 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642788746 |
Product | hydrogenase expression/formation protein HypE |
Protein accession | YP_002219321 |
Protein GI | 198283000 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0309] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA ATCCGCAACC GCGCGTCAAA AGACCCCATG GTGATGTGGT CAATCTTTCC CATGGCAGTG GTGGCAAGGC CATGCGGGAT CTGATCGAAG GATTGATTCT GCCCGCCCTG GGTGCCTCCA GTGCCACGCC GCTGGAGGAT CAGGCCCGCA TCGATGTACC GGAAGTCCTT GGGAACGGTG GCCGGATCGC CTTCACCACG GATTCCTACG TCGTCGATCC CCTCAGCTTT CCGGGCGGCG ACATCGGCAC GCTGGCCATC AATGGTACCG TAAACGATCT GGCGGTGGGC GGCGCACGGC CCATCGTGCT GAGTTGCTCC CTGATCCTGG AAGAGGGTCT GCCCTTCACC ATTCTGGAGA AGATGATGTG CAGCATGGCG CGGGCGGCAC AGGCGGCGCG GGTCAGGATC GTCACGGGGG ACACCAAAGT GGTGCCCCGG GGCAGCGCGG ACAAGCTGTT CATCAACACC GCCGGCATCG GAATCATCCC GAAGGGCGTC CATCTGGAGA TCGCCCGGAT CCGACCGGGT GACCAACTGC TGTTGAATGG CCACTTGGGG GATCATGGCG CCGCCATTTT GAAGGCGCGC GGCGATCTGG CCCTGGACGC GGATGTGGAG AGCGATTGCC AGCCCCTGCA CGGGATTATC GCCGCACTGC TGGCGGCGGC GCCGGGCACC CGATGCATCC GCGACGTGAC CCGCGGCGGG CTGGCCACGG TGCTCAACGA ATTTGCCGGA GGGGCTGGCG TGGGTATGCG CATCGTGGAG GATAGCATTC CCGTCCGCCC CGTGGTCAGA GGCATCTGCG AAGTGCTCGG CCTGGATCCC CTCTATCTGG CCAACGAAGG CAAACTCCTT GCGGTGGTGC CAAAGGAAGA GGCCGGGGCT GCCCTGGAGG CGCTGCGCTC CTGCCCGGAA GGCACCTACG CCGGGATGAT CGGCGAGGTG CTCGCGGGGC CTCCCGGAAG GGTCGTGCTG AGCAGCCATT TCGGCGGTGA ACGCATCGTC GATATGCTGG TGGGCGAACA GTTGCCGCGA ATCTGTTAG
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Protein sequence | MAANPQPRVK RPHGDVVNLS HGSGGKAMRD LIEGLILPAL GASSATPLED QARIDVPEVL GNGGRIAFTT DSYVVDPLSF PGGDIGTLAI NGTVNDLAVG GARPIVLSCS LILEEGLPFT ILEKMMCSMA RAAQAARVRI VTGDTKVVPR GSADKLFINT AGIGIIPKGV HLEIARIRPG DQLLLNGHLG DHGAAILKAR GDLALDADVE SDCQPLHGII AALLAAAPGT RCIRDVTRGG LATVLNEFAG GAGVGMRIVE DSIPVRPVVR GICEVLGLDP LYLANEGKLL AVVPKEEAGA ALEALRSCPE GTYAGMIGEV LAGPPGRVVL SSHFGGERIV DMLVGEQLPR IC
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