| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0863 |
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| Symbol | |
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| ID | 6876828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 820262 |
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| End bp | 821407 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788745 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002219320 |
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| Protein GI | 198282999 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.948564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTACG TGGATGAGTT CCGGGATCCC GAAAAGGCCC GCTATCTGGT CAAGGATATT
CAAAGGCTGG CGGCGCTGAT CCCGGCCACC GCGAACCGGC CGTTACAACT CATGGAGTTT
TGCGGTGGCC ACACCCATAC CATTTTCAAA TACGGTATCG AGCAGATGCT GCCGCCCTCC
GTGGAGCTGG TGCATGGGCC GGGTTGTCCG GTCTGCGTGC TGCCCATGGG CCGGGTGGAT
GATTGCGTGA CCATTGCCGA GTATCCGGAG GTGATATTCA CCACCTTCGG CGACGCCATG
CGGGTTCCCG GCTCGCGCAA GAGCCTGCTG CAGGCCAAGG CCACGGGCGC TGATGTGCGG
ATGGTCTATT CGCCGCTGGA TGCGCTGGCC ATCGCCAGAG ATAACCCGGA CCGGGAAGTG
GTGTTTTTCG GTCTCGGTTT TGAAACGACC ATGCCGGCGA CGGCGCTGAC CATTCTCGCC
GCAGAACGCC AGCGGGTGGC CAATTTTTCC GTATTCTGCA ATCACATCAC GACGCTGCCC
ACCATCAAGG CCATTCTCGA CTCCTCCGAT ATGGAGCTGG ACGGTTTCCT GGGCCCCGGC
CATGTCAGCA TGGTGATCGG TACCCATCCC TATCACTTTA TCGCCGGGCA TTACCACAAA
CCCGTGGTGA TCGCAGGGTT CGAGCCTCTG GACATCCTGC AGTCCCTGTG GATGCTGCTG
AAACAACTGG CCGAGCGGCG CTGCGCGGTG GAAAACCAGT ACGCGCGGAT CGTTCCCGAA
GCCGGCAACA CCCAGGCACT CGACGCCGTC CAGCAAGTGT TCGAGATCCG CGAGTACTTC
GAGTGGCGGG GGCTCGGCTC CATCGACCAC TCCGGCGTGA GGATCCGCAA TCGCTTTGCC
GCCTTCGACG CCGAGCGCCG CTTTACCGTA CCCAATCTGT CCATTGCCGA CCCCAAGGCG
TGTCAGTGCG GAGAGGTGCT CAAAGGGGTC ATAAGGCCTT GGGAATGCAA GGTCTTTGGC
GTCGCATGCA CCCCGGAAAC CCCGCTGGGC TCCTTGATGG TTTCTTCGGA AGGGGCATGT
GCCGCCTACT TCAATTATGG AAAGATGCCG GGAGAGGTTC CCGCTACGGC AGAGGAGGTG
TCCTGA
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| Protein sequence | MRYVDEFRDP EKARYLVKDI QRLAALIPAT ANRPLQLMEF CGGHTHTIFK YGIEQMLPPS
VELVHGPGCP VCVLPMGRVD DCVTIAEYPE VIFTTFGDAM RVPGSRKSLL QAKATGADVR
MVYSPLDALA IARDNPDREV VFFGLGFETT MPATALTILA AERQRVANFS VFCNHITTLP
TIKAILDSSD MELDGFLGPG HVSMVIGTHP YHFIAGHYHK PVVIAGFEPL DILQSLWMLL
KQLAERRCAV ENQYARIVPE AGNTQALDAV QQVFEIREYF EWRGLGSIDH SGVRIRNRFA
AFDAERRFTV PNLSIADPKA CQCGEVLKGV IRPWECKVFG VACTPETPLG SLMVSSEGAC
AAYFNYGKMP GEVPATAEEV S
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